GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 03:51:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Porphyra yezoensis cDNA, clone:PFL073a08_r, 5'end.
AU195299.1:214-233
CCTGGTGGAGGCGGGCTGGCGCCAGCGGCC214ACCGTGGCAGCCATAGATATGTCGAGCGAGTGCCACGAGAGTCTTTTTGT
py593 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874353.1:92-111
ACAAAAAGACTCTCGTGGCACTCGCTCGAC92ATATCTATGGCTGCCACGGTGGCCGCTGGCGCCAACCCGCCTCCACCAGG
py801 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874522.1:80-99
ACAAAAAGACTCTCGTGGCACTCGCTCGAC80ATATCTATGGCTGCCACGGTGGCCGCTGGCGCCAACCCGCCTCCACCAGG
pyF4 PY Sporophyte cDNA Library Pyropia yezoensis cDNA, mRNA sequence.
CX874580.1:91-110
ACAAAAAGACTCTCGTGGCACTCGCTCGAC91ATATCTATGGCTGCCACGGTGGCCGCTGGCGCCAACCCGCCTCCACCAGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACCGTGGCAGCCATAGATAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCGTGGCAGCCATAGATAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.099 | 0.090 | search_plus_done; http://172.18.8.135:50400/match?q=ACCGTGGCAGCCATAGATAT&k=0&no_gap=0&offset=0&limit=50
0.231 | 0.131 | search_minus_done; http://172.18.8.135:50400/match?q=ATATCTATGGCTGCCACGGT&k=0&no_gap=0&offset=0&limit=49
0.233 | 0.002 | cgi_end;

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