GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:23:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Mdfw2024i03.y1 Mdfw Malus domestica cDNA clone Mdfw2024i03 5' similar to TR:Q9XHG0 Q9XHG0 NBS/LRR DISEASE RESISTANCE PROTEIN RPM1, mRNA sequence.
CN489674.1:1-20
1ACCTAGAAGAATGGCCTGGGTCTTTTCTCGATACATTGAGTGGAAACATT
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:40174505-40174524
AATCTCATATTCGTTCTGTATTTACTTTCA40174505ACCTAGAAGAATGGCCTGGGTCTTTTCTCGATACATTGAGTGGAAACATT
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:29250863-29250882
AATCTCATATTCGTTCTGTATTTACTTTCA29250863ACCTAGAAGAATGGCCTGGGTCTTTTCTCGATACATTGAGTGGAAACATT
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:25964485-25964504
AATCTCATATTCGTTCTGTATTTACTTTCA25964485ACCTAGAAGAATGGCCTGGGTCTTTTCTCGATACATTGAGTGGAAACATT
Malus domestica genome assembly, chromosome: 1.
OU744542.1:29770066-29770085
AATCTCATATTCGTTCTGTATTTACTTTCA29770066ACCTAGAAGAATGGCCTGGGTCTTTTCTCGATACATTGAGTGGAAACATT
Malus domestica genome assembly, chromosome: 1.
OU744991.1:26243740-26243759
AATCTCATATTCGTTCTGTATTTACTTTCA26243740ACCTAGAAGAATGGCCTGGGTCTTTTCTCGATACATTGAGTGGAAACATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACCTAGAAGAATGGCCTGGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCTAGAAGAATGGCCTGGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.405 | 0.396 | search_plus_done; http://172.18.8.135:50400/match?q=ACCTAGAAGAATGGCCTGGG&k=0&no_gap=0&offset=0&limit=50
0.494 | 0.088 | search_minus_done; http://172.18.8.135:50400/match?q=CCCAGGCCATTCTTCTAGGT&k=0&no_gap=0&offset=0&limit=44
0.494 | 0.000 | cgi_end;

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