GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 18:59:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

OPSC01015 Elaeis guineensis Suspension cell cultures Elaeis guineensis cDNA clone 195-G11-T3.seq, mRNA sequence.
EL689241.1:482-505
ACTTGGCTGGAGACTTCTTTAGCCTTGCAG482ACCTCAGTCACGTACCTTTGCTGTACTACTTCATGGGCAGCCCTCATGCATCCG
OPR03028 Elaeis guineensis root Elaeis guineensis cDNA clone OPVRXX_A2107.seq, mRNA sequence.
EL692985.1:470-493
ACTTGGCTGGAGACTTCTTTAGCCTTGCAG470ACCTCAGTCACGTACCTTTGCTGTACTACTTCATGGGCAGCCCTCATGCATCCG
pOP-EAP03177_EST_C_1_pBSK_SK EA (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EAP03177 5', mRNA sequence.
EY406866.1:225-248
ACTTGGCTGGAGACTTCTTTAGCCTTGCAG225ACCTCAGTCACGTACCTTTGCTGTACTACTTCATGGGCAGCCCTCATGCATCCG
TSA: Elaeis guineensis isotig08734.Elguifruit mRNA sequence.
JO095964.1:567-590
ACTTGGCTGGAGACTTCTTTAGCCTTGCAG567ACCTCAGTCACGTACCTTTGCTGTACTACTTCATGGGCAGCCCTCATGCATCCG
Elaeis guineensis glutathione S-transferase (GST) mRNA, complete cds.
KC146054.1:576-599
ACTTGGCTGGAGACTTCTTTAGCCTTGCAG576ACCTCAGTCACGTACCTTTGCTGTACTACTTCATGGGCAGCCCTCATGCATCCG
Elaeis guineensis glutathione s-transferase (GST) mRNA, complete cds.
KF516927.1:578-601
ACTTGGCTGGAGACTTCTTTAGCCTTGCAG578ACCTCAGTCACGTACCTTTGCTGTACTACTTCATGGGCAGCCCTCATGCATCCG
OPMF00622 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 122-E09-T3.seq, mRNA sequence.
EL684384.1:335-358
CGGATGCATGAGGGCTGCCCATGAAGTAGT335ACAGCAAAGGTACGTGACTGAGGTCTGCAAGGCTAAAGAAGTCTCCAGCCAAGT
pOP-EO05890_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO05890 5', mRNA sequence.
EY412159.1:334-357
CGGATGCATGAGGGCTGCCCATGAAGTAGT334ACAGCAAAGGTACGTGACTGAGGTCTGCAAGGCTAAAGAAGTCTCCAGCCAAGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACCTCAGTCACGTACCTTTGCTGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCTCAGTCACGTACCTTTGCTGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.373 | 0.365 | search_plus_done; http://172.18.8.135:50400/match?q=ACCTCAGTCACGTACCTTTGCTGT&k=0&no_gap=0&offset=0&limit=50
0.599 | 0.225 | search_minus_done; http://172.18.8.135:50400/match?q=ACAGCAAAGGTACGTGACTGAGGT&k=0&no_gap=0&offset=0&limit=44
0.600 | 0.002 | cgi_end;

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