GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 06:13:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Brassica oleracea var. viridis mRNA, clone: KALE-001E19, 5' end sequence.
DK456062.1:121-140
TGAGTCTTCTTACAGATCTCGTTAACCTTA121ACCTCTCAGAGACAACTGACAAAATCATTGCGGAATACATATGGGTTGGA
h12_11na_1a.s 11na Brassica napus cDNA clone h12_11na_1a 5, mRNA sequence.
GT080702.1:82-101
TGAGTCTTCTTACAGATCTCGTTAACCTTA82ACCTCTCAGAGACAACTGACAAAATCATTGCGGAATACATATGGGTTGGA
Brassica napus mRNA for cytosolic glutamine synthetase isoform (BnGSR2-2).
Y12460.1:11-30
GTTAACCTTA11ACCTCTCAGAGACAACTGACAAAATCATTGCGGAATACATATGGGTTGGA
Crepidodera aurea genome assembly, chromosome: 2.
OX439473.1:16626669-16626688
AGCGCTATAGTTGAGGTCCCCAACCTGCCG16626669ACCTCTCAGAGACAACTGACGTTGTCCTTCGTTTTTTTTCTTTATTTATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACCTCTCAGAGACAACTGAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCTCTCAGAGACAACTGAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.210 | 0.202 | search_plus_done; http://172.18.8.135:50400/match?q=ACCTCTCAGAGACAACTGAC&k=0&no_gap=0&offset=0&limit=50
0.230 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=GTCAGTTGTCTCTGAGAGGT&k=0&no_gap=0&offset=0&limit=46
0.230 | 0.000 | cgi_end;

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