GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 17:20:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Tetrao urogallus genome assembly, chromosome: 2.
OX596295.1:59835567-59835586
GACTGCCTGGTATTCAGTGGTACTCACAGG59835567ACCTTTGTCATTGGTGGCTCAAGTGCACAATGAGCACTATCTTCAGTTTC
Lipophrys pholis genome assembly, chromosome: 12.
OY726544.1:12168084-12168103
TAAATGGGACAAACCGTCTACTGCCTGCAG12168084ACCTTTGTCATTGGTGGCTCTGTGGACACATTCTAAAATTACCCTCACAA
UNVERIFIED_ORG: Enterococcus phage Efs 1-1-1 clone NODE_2_length_160453_cov_9.703023 genomic sequence, sequence.
OR846588.1:156183-156202
CAATTAGGGATTAGTGGCAAAAGTAATCTA156183ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
JP 2002529046-A/871: Enterococcus faecialis polynucleotides and polypeptides.
BD194277.1:519-538
CAATTAGGGATTAGTGGCAAAAGTAATCTA519ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
KR 1019997010172-A/871: Enterococcus faecalis polynucleotides and polypeptides.
DI065025.1:519-538
CAATTAGGGATTAGTGGCAAAAGTAATCTA519ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Porphyra yezoensis cDNA clone:PM059g02_r, 5' end.
AV435596.1:419-438
CCTAACGTGCAGGCGGCGGTGGGGGCGAAC419ACCTTTGTCATTGGTGGCTCGTCGGCGCTGAAGGACCTGCAGGAAATGCT
Porphyra yezoensis cDNA clone:PS020c03_r, 5' end.
AV437363.1:395-414
CCTAACGTGCAGGCGGCGGTGGGGGCGAAC395ACCTTTGTCATTGGTGGCTCGTCGGCGCTGAAGGACCTGCAGGAAATGCT
Enterococcus faecalis strain C25 chromosome, complete genome.
CP030042.1:300525-300544
CAATTAGGGATTAGTGGCAAAAGTAATCTA300525ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain FDAARGOS_528 chromosome, complete genome.
CP033787.1:1272373-1272392
CAATTAGGGATTAGTGGCAAAAGTAATCTA1272373ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain 110 chromosome.
CP039752.1:267569-267588
CAATTAGGGATTAGTGGCAAAAGTAATCTA267569ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain BFFF11 chromosome, complete genome.
CP045918.1:2041005-2041024
CAATTAGGGATTAGTGGCAAAAGTAATCTA2041005ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain BFF1B1 chromosome, complete genome.
CP046022.1:1753978-1753997
CAATTAGGGATTAGTGGCAAAAGTAATCTA1753978ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain 133170041-3 chromosome, complete genome.
CP046108.1:482772-482791
CAATTAGGGATTAGTGGCAAAAGTAATCTA482772ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain 111540047-1 chromosome, complete genome.
CP046111.1:594440-594459
CAATTAGGGATTAGTGGCAAAAGTAATCTA594440ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain AR_0780 chromosome, complete genome.
CP063980.1:805469-805488
CAATTAGGGATTAGTGGCAAAAGTAATCTA805469ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain UAMS_EL56 chromosome, complete genome.
CP076488.1:635840-635859
CAATTAGGGATTAGTGGCAAAAGTAATCTA635840ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain UAMS_EL54 chromosome, complete genome.
CP076493.1:187191-187210
CAATTAGGGATTAGTGGCAAAAGTAATCTA187191ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain UAMS_EL53 chromosome, complete genome.
CP076498.1:797240-797259
CAATTAGGGATTAGTGGCAAAAGTAATCTA797240ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain EFS36 chromosome, complete genome.
CP085291.1:1666926-1666945
CAATTAGGGATTAGTGGCAAAAGTAATCTA1666926ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain E533 chromosome, complete genome.
CP086726.1:1873609-1873628
CAATTAGGGATTAGTGGCAAAAGTAATCTA1873609ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain NY13321 chromosome, complete genome.
CP093957.1:1046714-1046733
CAATTAGGGATTAGTGGCAAAAGTAATCTA1046714ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain NY13410 chromosome, complete genome.
CP106757.1:475420-475439
CAATTAGGGATTAGTGGCAAAAGTAATCTA475420ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain BE65 chromosome, complete genome.
CP110030.1:2247575-2247594
CAATTAGGGATTAGTGGCAAAAGTAATCTA2247575ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain BE52 chromosome, complete genome.
CP110036.1:254892-254911
CAATTAGGGATTAGTGGCAAAAGTAATCTA254892ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain BE51 chromosome, complete genome.
CP110038.1:1261310-1261329
CAATTAGGGATTAGTGGCAAAAGTAATCTA1261310ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain DM86 chromosome, complete genome.
CP116962.1:484433-484452
CAATTAGGGATTAGTGGTAAAAGTAATCTA484433ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain GENOMIC22-006 chromosome, complete genome.
CP119159.1:549417-549436
CAATTAGGGATTAGTGGCAAAAGTAATCTA549417ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain HL1 chromosome, complete genome.
CP124778.1:2575598-2575617
CAATTAGGGATTAGTGGCAAAAGTAATCTA2575598ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain EfsPNK7 chromosome, complete genome.
CP124887.1:460986-461005
CAATTAGGGATTAGTGGCAAAAGTAATCTA460986ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain EfsPF27 chromosome, complete genome.
CP124928.1:481715-481734
CAATTAGGGATTAGTGGCAAAAGTAATCTA481715ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain CF3A-343 chromosome, complete genome.
CP142820.1:2368660-2368679
CAATTAGGGATTAGTGGCAAAAGTAATCTA2368660ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis strain IDRL-7538 chromosome, complete genome.
CP143584.1:504955-504974
CAATTAGGGATTAGTGGCAAAAGTAATCTA504955ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCGGCG
Enterococcus faecalis isolate 26975_1#160 genome assembly, chromosome: 1.
LR962021.1:482851-482870
CAATTAGGGATTAGTGGCAAAAGTAATCTA482851ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis isolate 26975_1#188 genome assembly, chromosome: 1.
LR962078.1:471040-471059
CAATTAGGGATTAGTGGTAAAAGTAATCTA471040ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis isolate 26975_1#276 genome assembly, chromosome: 1.
LR962098.1:458650-458669
CAATTAGGGATTAGTGGTAAAAGTAATCTA458650ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis isolate 26975_1#236 genome assembly, chromosome: 1.
LR962110.1:498600-498619
CAATTAGGGATTAGTGGCAAAAGTAATCTA498600ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis isolate 26975_1#382 genome assembly, chromosome: 1.
LR962121.1:558444-558463
CAATTAGGGATTAGTGGCAAAAGTAATCTA558444ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis isolate 26975_1#368 genome assembly, chromosome: 1.
LR962125.1:470976-470995
CAATTAGGGATTAGTGGTAAAAGTAATCTA470976ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis isolate 27725_1#206 genome assembly, chromosome: 1.
LR962180.1:452612-452631
CAATTAGGGATTAGTGGCAAAAGTAATCTA452612ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis isolate 28157_4#258 genome assembly, chromosome: 1.
LR962382.1:483840-483859
CAATTAGGGATTAGTGGCAAAAGTAATCTA483840ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis isolate 27688_1#256 genome assembly, chromosome: 1.
LR962584.1:457780-457799
CAATTAGGGATTAGTGGCAAAAGTAATCTA457780ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis isolate 26975_2#33 genome assembly, chromosome: 1.
LR962700.1:481622-481641
CAATTAGGGATTAGTGGCAAAAGTAATCTA481622ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis isolate 26975_2#41 genome assembly, chromosome: 1.
LR962736.1:478666-478685
CAATTAGGGATTAGTGGCAAAAGTAATCTA478666ACCTTTGTCATTGGTGGCTCCTTAGGTCTCAGTGATTCAGTCCTTCAGCG
Enterococcus faecalis V583 chromosome, complete genome.
AE016830.1:2906605-2906624
CGCTGAAGGACTGAATCACTGAGACCTAAG2906605GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis K-4 DNA, complete genome.
AP025270.1:2487967-2487986
CGCTGAAGGACTGAATCACTGAGACCTAAG2487967GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus sp. PLM3 DNA, complete genome.
AP025690.1:2560555-2560574
CGCTGAAGGACTGAATCACTGAGACCTAAG2560555GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis SVR2330 DNA, complete genome.
AP026721.1:2855001-2855020
CGCTGAAGGACTGAATCACTGAGACCTAAG2855001GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis L6D DNA, complete genome.
AP027297.1:539786-539805
CGCTGAAGGACTGAATCACTGAGACCTAAG539786GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis 62, complete genome.
CP002491.1:120569-120588
CGCTGAAGGACTGAATCACTGAGACCTAAG120569GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis OG1RF, complete genome.
CP002621.1:2438696-2438715
CGCTGAAGGACTGAATCACTGAGACCTAAG2438696GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain CVM N60443F chromosome, complete genome.
CP028724.1:1111932-1111951
CGCTGAAGGACTGAATCACTGAGACCTAAG1111932GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain FC chromosome, complete genome.
CP028835.1:2669460-2669479
CGCTGAAGGACTGAATCACTGAGACCTAAG2669460GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain H25 chromosome, complete genome.
CP029612.1:2820996-2821015
CGCCGAAGGACTGAATCACTGAGACCTAAG2820996GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain C54 chromosome, complete genome.
CP030045.1:2492846-2492865
CGCTGAAGGACTGAATCACTGAGACCTAAG2492846GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain TY1 chromosome, complete genome.
CP031027.1:2754707-2754726
CGCTGAAGGACTGAATCACTGAGACCTAAG2754707GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis R712 chromosome, complete genome.
CP036249.1:2665055-2665074
CGCTGAAGGACTGAATCACTGAGACCTAAG2665055GAGCCACCAATGACAAAGGTTAGATTACTTTTACCACTAATCCCTAATTG
Enterococcus faecalis strain VE14089 chromosome, complete genome.
CP039296.1:2906888-2906907
CGCTGAAGGACTGAATCACTGAGACCTAAG2906888GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain Colony534 chromosome.
CP070621.1:105355-105374
CGCTGAAGGACTGAATCACTGAGACCTAAG105355GAGCCACCAATGACAAAGGTTAGATTACTTTTACCACTAATCCCTAATTG
Enterococcus faecalis strain L17 chromosome.
CP073085.1:2555510-2555529
CGCTGAAGGACTGAATCACTGAGACCTAAG2555510GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain 1207/14 chromosome, complete genome.
CP075604.2:2955468-2955487
CGCTGAAGGACTGAATCACTGAGACCTAAG2955468GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain NS2 chromosome, complete genome.
CP078162.1:2360824-2360843
CGCTGAAGGACTGAATCACTGAGACCTAAG2360824GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain E006 chromosome, complete genome.
CP082231.1:2542618-2542637
CGCTGAAGGACTGAATCACTGAGACCTAAG2542618GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain EFS17 chromosome, complete genome.
CP085289.1:851565-851584
CGCTGAAAGACTGAATCACTGAGACCTAAG851565GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain EFS108 chromosome, complete genome.
CP085294.1:158565-158584
CGCTGAAGGACTGAATCACTGAGACCTAAG158565GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain AFL-109F chromosome, complete genome.
CP109611.1:2497460-2497479
CGCTGAAGGACTGAATCACTGAGACCTAAG2497460GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain BE57 chromosome, complete genome.
CP110032.1:2332882-2332901
CGCTGAAGGACTGAATCACTGAGACCTAAG2332882GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain BE47 chromosome, complete genome.
CP110039.1:2475419-2475438
CGCTGAAGGACTGAATCACTGAGACCTAAG2475419GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain BE45 chromosome, complete genome.
CP110040.1:2463640-2463659
CGCTGAAGGACTGAATCACTGAGACCTAAG2463640GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain BE43 chromosome, complete genome.
CP110041.1:2611458-2611477
CGCTGAAGGACTGAATCACTGAGACCTAAG2611458GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain BE33 chromosome, complete genome.
CP110047.1:2591966-2591985
CGCTGAAGGACTGAATCACTGAGACCTAAG2591966GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG
Enterococcus faecalis strain BE32 chromosome, complete genome.
CP110050.1:2591894-2591913
CGCTGAAGGACTGAATCACTGAGACCTAAG2591894GAGCCACCAATGACAAAGGTTAGATTACTTTTGCCACTAATCCCTAATTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACCTTTGTCATTGGTGGCTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCTTTGTCATTGGTGGCTC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.135 | 0.127 | search_plus_done; http://172.18.8.135:50400/match?q=ACCTTTGTCATTGGTGGCTC&k=0&no_gap=0&offset=0&limit=50
0.182 | 0.047 | search_minus_done; http://172.18.8.135:50400/match?q=GAGCCACCAATGACAAAGGT&k=0&no_gap=0&offset=0&limit=7
0.200 | 0.018 | cgi_end;

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