GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 02:48:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

pOP-CNI01265_EST_C_1_pSK_SK CNI (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNI01265 5', mRNA sequence.
EY403602.1:120-143
CGAACACTCTCAGTCAAAGCCGGGAGCCTA120ATTGTCCCAGCTCGAATGACTCGTCCATGGATATGCATTCTGACAGCCCTACTC
pOP-EAP02319_EST_C_1_pBSK_SK EA (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EAP02319 5', mRNA sequence.
EY405522.1:559-582
CGAACACTCTCAGTCAAAGCCGGGAGCCTA559ATTGTCCCAGCTCGAATGACTCGTCCATGGATATGCATTCTGACAGCCCTACTC
TSA: Elaeis guineensis EgEfMPOB00191 holocarboxylase synthetase mRNA, complete cds, mRNA sequence.
EU285005.1:584-607
CGAACACTCTCAGTCAAAGCCGGGAGCCTA584ATTGTCCCAGCTCGAATGACTCGTCCATGGATATGCATTCTGACAGCCCTACTC
TSA: Elaeis guineensis isotig08760.Elguifruit mRNA sequence.
JO095990.1:737-760
CGAACACTCTCAGTCAAAGCCGGGAGCCTA737ATTGTCCCAGCTCGAATGACTCGTCCATGGATATGCATTCTGACAGCCCTACTC
Elaeis guineensis clone estEgSNP12 holocarboxylase synthetase (HCS) mRNA, complete cds.
JX438711.1:727-750
CGAACACTCTCAGTCAAAGCCGGGAGCCTA727ATTGTCCCAGCTCGAATGACTCGTCCATGGATATGCATTCTGACAGCCCTACTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACGAGTCATTCGAGCTGGGACAAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACGAGTCATTCGAGCTGGGACAAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.100 | 0.091 | search_plus_done; http://172.18.8.135:50400/match?q=ACGAGTCATTCGAGCTGGGACAAT&k=0&no_gap=0&offset=0&limit=50
0.291 | 0.191 | search_minus_done; http://172.18.8.135:50400/match?q=ATTGTCCCAGCTCGAATGACTCGT&k=0&no_gap=0&offset=0&limit=50
0.295 | 0.003 | cgi_end;

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