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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:02:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KR 1020140062712-A/31: A method for identifying hot pepper varieties using microsatellites markers.
DI378163.1:1-20
1ACGCCAAGAAAATCATCTCC
KS09087F11 KS09 Capsicum annuum cDNA, mRNA sequence.
CA517699.1:34-53
GATTTTGATGTTTTAATAGAGTAATTTAAC34ACGCCAAGAAAATCATCTCCTTTAACTAGAAAACCATCAATACAAAGCAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:15606116-15606135
GATTTTGATGTTTTAATAGAGTAATTTAAC15606116ACGCCAAGAAAATCATCTCCTTTAACTAGAAAACCATCAATACAAAGCAA
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:276184569-276184588
TTGCTTTGTATTGATGGTTTTCTAGTTAAA276184569GGAGATGATTTTCTTGGCGTGTTAAATTACTCTATTAAAACATCAAAATC
UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 3.
CP125975.1:108872556-108872575
CGTGATATCTAACATGCGGTAGATCAAGAG108872556GGAGATGATTTTCTTGGCGTCCTCGATACTAGTTGGACATGTGTTCCCCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACGCCAAGAAAATCATCTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACGCCAAGAAAATCATCTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.207 | 0.198 | search_plus_done; http://172.18.8.135:50400/match?q=ACGCCAAGAAAATCATCTCC&k=0&no_gap=0&offset=0&limit=50
0.305 | 0.098 | search_minus_done; http://172.18.8.135:50400/match?q=GGAGATGATTTTCTTGGCGT&k=0&no_gap=0&offset=0&limit=47
0.306 | 0.002 | cgi_end;

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