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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:51:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arachis hypogaea DNA, clone: AHGS42L23.
DH961586.1:335-354
AGAAGAGACGCGAGGCCACAGATGACGACG335ACGCCACCAGAGAGAACAATAGCACGTAATAGAGAGAGAGAGAGAGAGAG
Arachis hypogaea DNA, clone: SACT14J12.
DH964493.1:308-327
AGAAGAGACGCGAGGCCACGGATGACGACG308ACGCCACCAGAGAGAACAATAGCCCGTAAGAGAGAGAGAGAGAGAGAGAG
Arachis hypogaea DNA, clone: KICT07I10.
DH966673.1:16-35
CCACAGATGACGACG16ACGCCACCAGAGAGAACAATAGCACGTAAGAGAGAGAGAGAGAGAGAGAG
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:28521190-28521209
AGATGAGATGCGCGGCCACGAATAACGACA28521190ACGCCACCAGAGAGAACAATAGCAGGTAATAGAGAGAGAAGAGAAAAGGG
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:130839724-130839743
AATAGGAAGGTCTGATTGTGGGTTCCGACG130839724ACGCCACCAGAGAGAACAATAGCATGTAATAGAGAGAGAAGAGAAAATGG
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:7578384-7578403
AGATGAGACGCGAAGCCACGGATGATGACG7578384ACGCCACCAGAGAGAACAATAGCAGGTAGGGGTGTTCAAAACCGATCCAT
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:9176893-9176912
AGAAGAGACGCGAGGCCACAGATGACGACG9176893ACGCCACCAGAGAGAACAATAGCACGTAATAGAGAGAGAGAGAGAGAGAG
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:4080370-4080389
AGAAGAGACACGAGGCCACGGATGACGACG4080370ACGCCACCAGAGAGAACAATAGCACGTAATAGAGAGAGAGAGAGAGAGAG
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:128216595-128216614
AATAGGAAGGTCTGATTGTGGGTTCCGACG128216595ACGCCACCAGAGAGAACAATAGCATGTAATAGAGAGAGAAGAGAAAATGG
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:7701993-7702012
AGATGAGACGCGAAGCCACGGATGATGACG7701993ACGCCACCAGAGAGAACAATAGCAGGTAGGGGTGTTCAAAACCGATCCAT
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:9822647-9822666
AGAAGAGACGCGAGGCCACAGATGACGACG9822647ACGCCACCAGAGAGAACAATAGCACGTAATAGAGAGAGAGAGAGAGAGAG
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:22372173-22372192
CTTTTCTCTTTTCTCTCTCTATTATGTGCT22372173ATTGTTCTCTCTGGTGGCGTCGTCGTCATCCGTGGACTAAGGAAAGACCG
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:137416009-137416028
CTCTCTCTCTCTCTCTCTCTCTTACGGGCT137416009ATTGTTCTCTCTGGTGGCGTCGTCGTCATCCGTGGCCTCGCGTCTCTTCT
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:17264250-17264269
CCCTTTTCTCTTCTTTCTCTATTACGTGCT17264250ATTGTTCTCTCTGGTGGCGTCGTCGGAACCCACAATCAGACCTTCCTATT
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:135899211-135899230
CTCTCTCTCTCTCTCTCTCTCTTACGGGCT135899211ATTGTTCTCTCTGGTGGCGTCGTCGTCATCCGTGGCCTCGCGTCTCTTCT
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:18007795-18007814
CCCTTTTCTCTTCTTTCTCTATTACGTGCT18007795ATTGTTCTCTCTGGTGGCGTCGTCGGAACCCACAATCAGACCTTCCTATT
Caenorhabditis uteleia genome assembly, chromosome: II.
OY752134.1:12093827-12093846
TGATTTACCTCAAACCATCGACGATCCACA12093827ATTGTTCTCTCTGGTGGCGTCTTGTTTTTATCGAATTTCACAATTTCGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACGCCACCAGAGAGAACAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACGCCACCAGAGAGAACAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.240 | 0.231 | search_plus_done; http://172.18.8.135:50400/match?q=ACGCCACCAGAGAGAACAAT&k=0&no_gap=0&offset=0&limit=50
0.345 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=ATTGTTCTCTCTGGTGGCGT&k=0&no_gap=0&offset=0&limit=39
0.350 | 0.004 | cgi_end;

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