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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:29:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

pOP-EO02713_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02713 5', mRNA sequence.
EY413614.1:10-27
CCCGCTTTT10ACGCGACCCCTACGATCATCGATCTCTCCCTCCCCCCCTCCTCTCTCT
Microbacterium foliorum strain 122 chromosome, partial genome.
CP019892.1:964628-964645
CCTTGCCGATGCGGGTGCGTGTGAGGAAGA964628ACGCGACCCCTACGATCACGACGATGCTGACGACGATTCCGATCAGGT
Nomada fucata genome assembly, chromosome: 4.
OX411278.1:8156701-8156718
TGTACGGGCAGATTAACGTCATTATTAATT8156701ACGCGACCCCTACGATCAAACTTTCCCCTCGTTTATCTTAATTAATTG
EG-E11_002_A04 embsomSSHE1, Early somatic embryos (SSH) BAP/no BAP Elaeis guineensis cDNA clone EG-E11_002_A04, mRNA sequence.
JK668591.1:289-306
AGAGAGAGGAGGGGGGGAGGGAGAGATCGA289TGATCGTAGGGGTCGCGTCCCCGCGTA
EG-E11_002_G07 embsomSSHE1, Early somatic embryos (SSH) BAP/no BAP Elaeis guineensis cDNA clone EG-E11_002_G07, mRNA sequence.
JK668664.1:289-306
AGAGAGAGGAGGGGGGGAGGGAGAGATCGA289TGATCGTAGGGGTCGCGTCCCCGCGTA
Wolffia australiana isolate 7733 chromosome 12.
CP092611.1:11666229-11666246
GCAGGACGAAGAATCTGAAGGCCTGAATGC11666229TGATCGTAGGGGTCGCGTGGGCGAATGGCTGCGCACGGCTGCCGCGTG
Geotrupes spiniger genome assembly, chromosome: 4.
OY390734.1:5988631-5988648
TGTTCGATCGTCAATATCTTCGAGTCATAA5988631TGATCGTAGGGGTCGCGTGTTTCCTGTTGGAATATGCTGCCAGTATAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACGCGACCCCTACGATCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACGCGACCCCTACGATCA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.212 | 0.203 | search_plus_done; http://172.18.8.135:50400/match?q=ACGCGACCCCTACGATCA&k=0&no_gap=0&offset=0&limit=50
0.491 | 0.279 | search_minus_done; http://172.18.8.135:50400/match?q=TGATCGTAGGGGTCGCGT&k=0&no_gap=0&offset=0&limit=47
0.494 | 0.003 | cgi_end;

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