GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 03:47:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

JP 2010512141-A/236: TRANSCRIPTION FACTORS.
FW351854.1:294-321
ACAAGCCTTAGGTTCTTCACCTCGACAGAG294ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
JP 2010512141-A/237: TRANSCRIPTION FACTORS.
FW351855.1:294-321
ACAAGCCTTAGGTTCTTCACCTCGACAGAG294ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
Sequence 244 from patent US 7507875.
GP284185.1:294-321
ACAAGCCTTAGGTTCTTCACCTCGACAGAG294ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
Sequence 245 from patent US 7507875.
GP284186.1:294-321
ACAAGCCTTAGGTTCTTCACCTCGACAGAG294ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
Sequence 244 from patent US 8110723.
GZ147211.1:294-321
ACAAGCCTTAGGTTCTTCACCTCGACAGAG294ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
Sequence 245 from patent US 8110723.
GZ147212.1:294-321
ACAAGCCTTAGGTTCTTCACCTCGACAGAG294ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
Sequence 244 from Patent EP1639089.
HH970506.1:294-321
ACAAGCCTTAGGTTCTTCACCTCGACAGAG294ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
Sequence 245 from Patent EP1639089.
HH970507.1:294-321
ACAAGCCTTAGGTTCTTCACCTCGACAGAG294ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
Sequence 244 from patent US 8962947.
HK479095.1:294-321
ACAAGCCTTAGGTTCTTCACCTCGACAGAG294ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
Sequence 245 from patent US 8962947.
HK479096.1:294-321
ACAAGCCTTAGGTTCTTCACCTCGACAGAG294ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
JP 2011087577-A/236: TRANSCRIPTION FACTORS.
HV336142.1:294-321
ACAAGCCTTAGGTTCTTCACCTCGACAGAG294ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
JP 2011087577-A/237: TRANSCRIPTION FACTORS.
HV336143.1:294-321
ACAAGCCTTAGGTTCTTCACCTCGACAGAG294ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
JP 2011229530-A/236: TRANSCRIPTION FACTORS.
HV544880.1:294-321
ACAAGCCTTAGGTTCTTCACCTCGACAGAG294ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
JP 2011229530-A/237: TRANSCRIPTION FACTORS.
HV544881.1:294-321
ACAAGCCTTAGGTTCTTCACCTCGACAGAG294ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
000001602152_M20.ab1 Eucalyptus globulus under low temperature Eucalyptus globulus cDNA, mRNA sequence.
ES592072.1:318-345
ACAAGCCTTAGGTTCTTCACCTCGACAGAG318ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
000001602252_I24.ab1 Eucalyptus globulus under low temperature Eucalyptus globulus cDNA, mRNA sequence.
ES592315.1:334-361
ACAAGCCTTAGGTTCTTCACCTCGACAGAG334ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
Eucalyptus camaldulensis mRNA, clone: ENM102F22, 3'-EST.
FY794430.1:268-295
ACAAGCCTTAGGTTCTTCACCTCGACAGAG268ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
GR-ML-001-BA-036-D10 Mature leaves (EUGR-ML) Eucalyptus grandis cDNA clone GR-ML-001-BA-036-D10 5', mRNA sequence.
HO766777.1:262-289
ACAAGCCTTAGGTTCTTCACCTCGACAGAG262ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
GR-SE-001-GO-102-G02 Seedlings (EUGR-SE) Eucalyptus grandis cDNA clone GR-SE-001-GO-102-G02 5', mRNA sequence.
HS054169.1:187-214
ACAAGCCTTAGGTTCTTCACCTCGACAGAG187ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
GR-SE-001-GO-102-G01 Seedlings (EUGR-SE) Eucalyptus grandis cDNA clone GR-SE-001-GO-102-G01 5', mRNA sequence.
HS054212.1:187-214
ACAAGCCTTAGGTTCTTCACCTCGACAGAG187ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
GR-TS-002-CN-076-E02 Treated seedlings (EUGR-TS) Eucalyptus grandis cDNA clone GR-TS-002-CN-076-E02 5', mRNA sequence.
HS067678.1:112-139
ACAAGCCTTAGGTTCTTCACCTCGACAGAG112ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG
EMBRA942 Eucalyptus plant tissues, from EST sequencing Eucalyptus grandis STS cDNA, sequence tagged site.
GF110000.1:201-228
ACAAGCCTTAGGTTCTTCACCTCGACAGAG201ACGCGGAGGGAAGACGAGACAGTTTGATCGTCTGAAGAAACCGCTGTCATGGAAGTAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACGCGGAGGGAAGACGAGACAGTTTGAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACGCGGAGGGAAGACGAGACAGTTTGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.025 | 1.016 | search_plus_done; http://172.18.8.135:50400/match?q=ACGCGGAGGGAAGACGAGACAGTTTGAT&k=0&no_gap=0&offset=0&limit=50
1.056 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=ATCAAACTGTCTCGTCTTCCCTCCGCGT&k=0&no_gap=0&offset=0&limit=28
1.056 | 0.000 | cgi_end;

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