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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 17:30:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Platichthys flesus genome assembly, chromosome: 1.
OX438716.1:25610848-25610867
TTCGCAGACCTTTTAGGCTTGTGGACAATC25610848ACGGAAAACACAGACAAGACATTGCAGTTGTTTGTCTTTTAGTGGAGCAC
Gymnoscopelus microlampas genome assembly, chromosome: 14.
OY732716.1:27528203-27528222
TACACAGGAGCCGAGGCTACACAAGTCTAC27528203ACGGAAAACACAGACAAGACTAAAGAGTGCATTTAGCAGATCGAGACACC
Lotus japonicus genomic DNA, chromosome 1, clone: LjB16L15, BM1010.
AP007739.2:89165-89184
TCAGAATGATCCGAAATTAATGCTTGAAAA89165ACGGAAAACACAGACAAGACCTGGAATGTCGAATATAATAATAATAATAA
Lotus japonicus genomic DNA, chromosome 1, clone: LjT43P05, TM0113.
AP004942.1:7260-7279
TCAGAATGATCCGAAATTAATGCTTGAAAA7260ACGGAAAACACAGACAAGACCTGGAATGTCGAATATAATAATAATAATAA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:109782955-109782974
TCAGAATGATCCGAAATTAATGCTTGAAAA109782955ACGGAAAACACAGACAAGACCTGGAATGTCGAATATAATAATAATAATAA
Cheilosia impressa genome assembly, chromosome: 4.
OX411883.1:46818423-46818442
GTCTAATAATATTGTTCGTTTTTTATAGAA46818423ACGGAAAACACAGACAAGACGATTCTCTTGGACCACCATCAACTTTTCTT
Vespertilio murinus genome assembly, chromosome: 5.
OZ004708.1:135652917-135652936
TACAGTGTGTCTTTATATTTATTAAACGAT135652917GTCTTGTCTGTGTTTTCCGTGTCAGGACCTATAGATCTACTCCTGTGAGG
Gymnoscopelus braueri genome assembly, chromosome: 18.
OY725525.1:32523066-32523085
TTATATTATGATGAATGCTATATTAAACGA32523066GTCTTGTCTGTGTTTTCCGTAGGTGAAGCCCAAAGTGATTGAGCCGTTGG
Warburgia ugandensis isolate CL-2023a chromosome 3.
CP141128.1:91793654-91793673
CAAAACAAAAGAAGCCAATTTAAGTATAGA91793654GTCTTGTCTGTGTTTTCCGTGCCAAGTCCTTTTTAGATTTTTTTTAAGAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACGGAAAACACAGACAAGAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACGGAAAACACAGACAAGAC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.380 | 0.372 | search_plus_done; http://172.18.8.135:50400/match?q=ACGGAAAACACAGACAAGAC&k=0&no_gap=0&offset=0&limit=50
0.486 | 0.106 | search_minus_done; http://172.18.8.135:50400/match?q=GTCTTGTCTGTGTTTTCCGT&k=0&no_gap=0&offset=0&limit=44
0.489 | 0.002 | cgi_end;

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