GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 23:28:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Elaeis guineensis EST, clone (6lib)_isotig19228.
LM615970.1:860-883
TTCAGGGATGGGGCGAGGAATGGTCTTCAC860ACGGCATGGATTGTTTGGAGAACCACTCCAGTTTCTACCAACAACAGTACCTAA
Narthecium ossifragum genome assembly, chromosome: 7.
OY986969.1:25041548-25041571
CTCGGGAATTGGACGAGGAATGGTCTTGAC25041548ACGGCATGGATTGTTTGGAGAACCACTCCAGTTTCTACCCACTACTGTACCTAA
Sequence 3916 from patent US 10858665.
MX132268.1:1336-1359
TTAGGTACTGTTGTTGGTAGAAACTGGAGT1336GGTTCTCCAAACAATCCATGCCGTGTGAAGACCATTCCTCGCCCCATCCCTGAA
Sequence 3916 from patent US 11485982.
OO834653.1:1336-1359
TTAGGTACTGTTGTTGGTAGAAACTGGAGT1336GGTTCTCCAAACAATCCATGCCGTGTGAAGACCATTCCTCGCCCCATCCCTGAA
Sequence 3916 from patent US 11512323.
OO918355.1:1336-1359
TTAGGTACTGTTGTTGGTAGAAACTGGAGT1336GGTTCTCCAAACAATCCATGCCGTGTGAAGACCATTCCTCGCCCCATCCCTGAA
TSA: Pandanus boninensis mRNA, contig: Pb_c11342.
FX173092.1:26-49
AGTTAGTACGGGTAGGAACTGGAGT26GGTTCTCCAAACAATCCATGCCGTGTGAAGACCATTCCTCGACCCTATTCCTGA
TSA: Elaeis guineensis isotig05957.Elguifruit mRNA sequence.
JO093209.1:1297-1320
TTAGGTACTGTTGTTGGTAGAAACTGGAGT1297GGTTCTCCAAACAATCCATGCCGTGTGAAGACCATTCCTCGCCCCATCCCTGAA
TSA: Elaeis guineensis isotig05958.Elguifruit mRNA sequence.
JO093210.1:1863-1886
TTAGGTACTGTTGTTGGTAGAAACTGGAGT1863GGTTCTCCAAACAATCCATGCCGTGTGAAGACCATTCCTCGCCCCATCCCTGAA
Elaeis guineensis putative transmembrane 9 superfamily member 3 protein (TM9SF3) mRNA, complete cds.
KC146067.1:1312-1335
TTAGGTACTGTTGTTGGTAGAAACTGGAGT1312GGTTCTCCAAACAATCCATGCCGTGTGAAGACCATTCCTCGCCCCATCCCTGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACGGCATGGATTGTTTGGAGAACC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACGGCATGGATTGTTTGGAGAACC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.223 | 0.215 | search_plus_done; http://172.18.8.135:50400/match?q=ACGGCATGGATTGTTTGGAGAACC&k=0&no_gap=0&offset=0&limit=50
0.512 | 0.289 | search_minus_done; http://172.18.8.135:50400/match?q=GGTTCTCCAAACAATCCATGCCGT&k=0&no_gap=0&offset=0&limit=48
0.517 | 0.005 | cgi_end;

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