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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-17 02:29:01, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica oleracea var. viridis mRNA, clone: KALE-006F09, 3' end sequence.
DK517611.1:150-169
TGGCTTCGGGTTTAGCTGAAGTGATCAAGT150ACGGGCTTATTAGGGATGCTGACTTCTTTGAGTGGCAGGAGAAGAACATT
Brassica oleracea var. viridis mRNA, clone: KALE-007B04, 3' end sequence.
DK517893.1:111-130
TGGCTTCGGGTTTAGCTGAAGTGATCAAGT111ACGGGCTTATTAGGGATGCTGACTTCTTTGAGTGGCAGGAGAAGAACATT
Brassica oleracea var. viridis mRNA, clone: KALE-014G22, 3' end sequence.
DK520680.1:118-137
TGGCTTCGGGTTTAGCTGAAGTGATCAAGT118ACGGGCTTATTAGGGATGCTGACTTCTTTGAGTGGCAGGAGAAGAACATT
Brassica oleracea var. viridis mRNA, clone: KALE-027N06, 3' end sequence.
DK525803.1:152-171
TGGCTTCGGGTTTAGCTGAAGTGATCAAGT152ACGGGCTTATTAGGGATGCTGACTTCTTTGAGTGGCAGGAGAAGGACATT
Brassica oleracea var. viridis mRNA, clone: KALE-047J23, 3' end sequence.
DK533367.1:62-81
TGGCTTCGGGTTTAGCTGAAGTGATCAAGT62ACGGGCTTATTAGGGATGCTGACTTCTTTGAGTGGCAGGAGAAGAACATT
Brassica oleracea var. viridis mRNA, clone: KALE-054I20, 3' end sequence.
DK535997.1:91-110
TGGCTTCGGGTTTAGCTGAAGTGATCAAGT91ACGGGCTTATTAGGGATGCTGACTTCTTTGAGTGGCAGGAGAAGAACATT
Brassica oleracea var. viridis mRNA, clone: KALE-073N24, 3' end sequence.
DK543390.1:53-72
TGGCTTCGGGTTTAGCTGAAGTGATCAAGT53ACGGGCTTATTAGGGATGCTGACTTCTTTGAGTGGCAGGAGAAGAACATT
Brassica oleracea var. viridis mRNA, clone: KALE-103A06, 3' end sequence.
DK554529.1:124-143
TGGCTTCGGGTTTAGCTGAAGTGATCAAGT124ACGGGCTTATTAGGGATGCTGACTTCTTTGAGTGGCAGGAGAAGAACATT
Brassica oleracea var. viridis mRNA, clone: KALE-114N18, 3' end sequence.
DK559048.1:125-144
TGGCTTCGGGTTTAGCTGAAGTGATCAAGT125ACGGGCTTATTAGGGATGCTGACTTCTTTGAGTGGCAGGAGAAGAACATT
Brassica oleracea var. viridis mRNA, clone: KALE-136J18, 3' end sequence.
DK567351.1:162-181
TGGCTTCGGGTTTAGCTGAAGTGATCAAGT162ACGGGCTTATTAGGGATGCTGACTTCTTTGAGTGGCAGGAGAAGAACATT
Brassica oleracea HDEM genome, scaffold: C9.
LR031875.1:7371189-7371208
TGGCTTCGGGTTTAGCTGAAGTGATCAAGT7371189ACGGGCTTATTAGGGATGCTGACTTCTTTGAGTGGCAGGAGAAGAACATT
Primula veris genome assembly, chromosome: 12.
OY821751.1:3703355-3703374
TGGCATCAGGGTTCGCAGAGGTTATAAAAT3703355ACGGGCTTATTAGGGATGCTGACTTTTTCGAGTGGCAAGAGAAGAACATG
Primula vulgaris genome assembly, chromosome: 4.
OY987215.1:3414665-3414684
TGGCATCAGGGTTCGCAGAGGTTATAAAAT3414665ACGGGCTTATTAGGGATGCTGACTTTTTCGAGTGGCAAGAGAAGAACATG
odh99c08.g1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BH955671.1:167-186
AATGTTCTTCTCCTGCCACTCAAAGAAGTC167AGCATCCCTAATAAGCCCGTACTTGATCACTTCAGCTAAACCCGAAGCCA
oeh37f03.g1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BH986102.1:369-388
AATGTTCTTCTCCTGCCACTCAAAGAAGTC369AGCATCCCTAATAAGCCCGTACTTGATCACTTCAGCTAAACCCGAAGCCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACGGGCTTATTAGGGATGCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACGGGCTTATTAGGGATGCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.905 | 0.896 | search_plus_done; http://172.18.8.135:50800/match?q=ACGGGCTTATTAGGGATGCT&k=0&no_gap=0&offset=0&limit=50
1.048 | 0.143 | search_minus_done; http://172.18.8.135:50800/match?q=AGCATCCCTAATAAGCCCGT&k=0&no_gap=0&offset=0&limit=37
1.050 | 0.001 | cgi_end;

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