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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-20 03:48:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Cicer arietinum chromosome Ca3.
CP039333.1:25635766-25635789
TGATGATATCTCTTTCCTTAGATCAGAAAT25635766ACGGTTGTATGTTTTGCTTACTGCATTTCTAAGAATCTGTTGCATGGAAAACAA
Cicer arietinum chromosome Ca3.
CP040768.1:25635766-25635789
TGATGATATCTCTTTCCTTAGATCAGAAAT25635766ACGGTTGTATGTTTTGCTTACTGCATTTCTAAGAATCTGTTGCATGGAAAACAA
Medicago arabica genome assembly, chromosome: 6.
OX326969.1:43504899-43504922
AGATGTTATTTCTTTCCTTAGATCAGAAAT43504899ACGGTTGTATGTTTTGCTTACTGCATTTCTAAGAACCTGTTGGATGAAAAACAA
Vicia faba genome assembly, chromosome: 5.
OX451740.1:521829047-521829070
AGATGATATTTCTTTCCTTAGATCAGAAAT521829047ACGGTTGTATGTTTTGCTTACTGCATTTCTAAGAACCTGTTGGATGGAAAACAA
Trifolium dubium genome assembly, chromosome: 4.
OX638065.1:40864840-40864863
AGATGATATTTCTTTCCTTAGATCAGAAAT40864840ACGGTTGTATGTTTTGCTTACTGCATTTCTAAGAACCTGTTGAATGGAAAACAA
Medicago truncatula chromosome 7 clone mth2-19e15, complete sequence.
AC149131.3:48091-48114
TTGTTTTTCATCCAACAGGTTCTTAGAAAT48091GCAGTAAGCAAAACATACAACCGTATTTCTGATCTAAGGAAAGAAATAACATCT
Trifolium repens isolate ACLI19 chromosome 07_0cc.
CP125848.1:17831160-17831183
TTGTTTTCCATCGAACAGGTCCTTAGAAAT17831160GCAGTAAGCAAAACATACAACCGTATTTCTGATCTAAGGAAAGAAATATTATCT
Trifolium repens isolate ACLI19 chromosome 07_Pall.
CP125849.1:18776387-18776410
TTGTTTTCCATCGAACAGGTCCTTAGAAAT18776387GCAGTAAGCAAAACATACAACCGTATTTCTGATCTAAGAAAAGAAATATTATCT
Medicago truncatula ABH1 mRNA, partial cds.
KM398981.1:1747-1770
ACAGATCGTCCATGGGAGGTTCTTAGAAAT1747GCAGTAAGCAAAACATACAACCGTATTTCTGATCTAAGGAAAGAAATAACATCT
Trifolium subterraneum genome assembly, chromosome: 8.
OX637468.1:18409289-18409312
TTGTTTTCCATTCAACAGGTCCTTAGAAAT18409289GCAGTAAGCAAAACATACAACCGTATTTCTGATCTAAGGAAAGAAATATTATCT
Medicago lupulina genome assembly, chromosome: 2.
OY283140.1:16300607-16300630
TTGTTTTTCATCCAACAGGTTCTTAGAAAT16300607GCAGTAAGCAAAACATACAACCGTATTTCTGATCTAAGGAAAGAAATAACATCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACGGTTGTATGTTTTGCTTACTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACGGTTGTATGTTTTGCTTACTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.225 | 0.217 | search_plus_done; http://172.18.8.135:50400/match?q=ACGGTTGTATGTTTTGCTTACTGC&k=0&no_gap=0&offset=0&limit=50
0.359 | 0.133 | search_minus_done; http://172.18.8.135:50400/match?q=GCAGTAAGCAAAACATACAACCGT&k=0&no_gap=0&offset=0&limit=45
0.363 | 0.004 | cgi_end;

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