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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 11:40:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Pyrus x bretschneideri Unigene3047_XinShao mRNA sequence.
JR598361.1:183-202
TGTCGCTTAACTCCAACGATATGTTCTGTC183ACTAAACCTCCATACGAGCACAAAGAAGCTCACTATAACCTTGGTAATAG
TSA: Pyrus x bretschneideri Unigene78265_XinShao mRNA sequence.
JR663206.1:183-202
TGTCGCTTAACTCCAACGATATGTTCTGTC183ACTAAACCTCCATACGAGCACAAAGAAGCTCACTATAACCTTGGTAATAG
TSA: Pyrus x bretschneideri Unigene78267_XinShao mRNA sequence.
JR663208.1:183-202
TGTCGCTTAACTCCAACGATATGTTCTGTC183ACTAAACCTCCATACGAGCACAAAGAAGCTCACTATAACCTTGGTAATAG
TSA: Pyrus x bretschneideri Unigene78268_XinShao mRNA sequence.
JR663209.1:183-202
TGTCGCTTAACTCCAACGATATGTTCTGTC183ACTAAACCTCCATACGAGCACAAAGAAGCTCACTATAACCTTGGTAATAG
TSA: Pyrus x bretschneideri Unigene78269_XinShao mRNA sequence.
JR663210.1:145-164
TGTCGCTTAACTCCAACGATATGTTCTGTC145ACTAAACCTCCATACGAGCACAAAGAAGCTCACTATAACCTTGGTAATAG
TSA: Pyrus x bretschneideri Unigene78270_XinShao mRNA sequence.
JR663211.1:145-164
TGTCGCTTAACTCCAACGATATGTTCTGTC145ACTAAACCTCCATACGAGCACAAAGAAGCTCACTATAACCTTGGTAATAG
TSA: Pyrus pyrifolia mRNA, contig: contig_12629revcomp.
FX430799.1:368-387
CTATTACCAAGGTTATAGTGAGCTTCTTTG368TGCTCGTATGGAGGTTTAGTGACGGAACATATCGTTAGGAAAAAGTTTAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTAAACCTCCATACGAGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTAAACCTCCATACGAGCA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.228 | 0.219 | search_plus_done; http://172.18.8.135:50400/match?q=ACTAAACCTCCATACGAGCA&k=0&no_gap=0&offset=0&limit=50
0.303 | 0.076 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTCGTATGGAGGTTTAGT&k=0&no_gap=0&offset=0&limit=44
0.304 | 0.001 | cgi_end;

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