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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:07:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Peromyscus eremicus genome assembly, chromosome: 5.
OX460470.1:65285802-65285818
AATGATCTAACCCAGATGTGGACTCTATTT65285802ACTACAGCGCTGACCTGCCAGGCAAGGTGCGGCTCTACAATAGTGGC
Plecotus auritus genome assembly, chromosome: 15.
OY734037.1:13294891-13294907
GGATCACCCACTTCGCAGGCAGCTCTTATA13294891ACTACAGCGCTGACCTGTGATTATGTCAGCATTCTGGGTTGAAGGGC
Epinephelus fuscoguttatus DNA, LG18, complete sequence.
AP022692.1:556931-556947
TTAACGGGGGCCGTATCTTCATCTATCCCG556931ACTACAGCGCTGACCTGACGAAGAGGCGCTGGTCCTTCGATCAGGTA
Lateolabrax maculatus chromosome Lm21.
CP027282.1:5288922-5288938
AACTTCAACAAACTAAAAAATTCACCTCAC5288922ACTACAGCGCTGACCTGGCCCTCACCCTACACCCACAGCCCCTCATA
Lateolabrax maculatus linkage group 18 genomic sequence, sequence.
CP032592.1:7761278-7761294
AACTTCAACAAACTAAAAAATTCACCTCAC7761278ACTACAGCGCTGACCTGGCCCTCACCCCACACCCACAGCCCCTCATA
Erpetoichthys calabaricus genome assembly, chromosome: 8.
LR536439.2:9549391-9549407
GCGTCGTCCTCTCCCAACCCTCCTCTCTGG9549391ACTACAGCGCTGACCTGTCCACTGCCAGGCACGTTCTGACAGAGAGG
Erpetoichthys calabaricus genome assembly, chromosome: 8.
LR536439.2:169771686-169771702
GCGTCGTGCTCTCCTAGCCCTCCTGTCTGG169771686ACTACAGCGCTGACCTGTCCGCCCGCCGCGTTCTGACAAAGCAGTTT
Barbus barbus genome assembly, chromosome: 46.
OW387162.1:2219758-2219774
AACAGCATGAATCTTCAGGAAGTGAACAGA2219758ACTACAGCGCTGACCTGACTCAGCTTAACTTAGACTAATCAGACATT
Xyrichtys novacula genome assembly, chromosome: 2.
OY660865.1:18262523-18262539
CAGAAACAGGAAAAAGGTTTGAATGCCGTG18262523ACTACAGCGCTGACCTGGGGGAGCATTCAGCTCAGACAGTGACTCAT
Labrus mixtus genome assembly, chromosome: 12.
OY757295.1:18435600-18435616
TTCCGGTGACTCATGCTGCTCTCTGGGCAG18435600ACTACAGCGCTGACCTGGAACACTATGTCCGTCTGGCTTTTATTACA
Labrus bergylta genome assembly, chromosome: 15.
OZ005723.1:18481476-18481492
TTCCGGTGACTCATGCTGCTCTCTGGGCAG18481476ACTACAGCGCTGACCTGGAACACTATGTCCGTCTGGCTTTTATTACA
AIAA-aaf37p02.b1 Ancylostoma caninum whole genome shotgun library (AIAAGSS 001) Ancylostoma caninum genomic, genomic survey sequence.
CZ217274.1:241-257
TCCACATATCGGGAAAAACGCCATAACCAA241ACTACAGCGCTGACCTGATTGCGGTGGTCCTTGACGTGCAGCATTTC
Bo-LGGI-151G4TR Bo-LGGI Brassica oleracea genomic clone 151G4, genomic survey sequence.
KG700025.1:117-133
TTATAACGCAGTTACATAATTTTAAGGGTA117ACTACAGCGCTGACCTGCGTTTTTCTTGAGTATCAACAAAGCTTCCA
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:27685-27701
TTATAACGCAGTTACATAATTTTAAGGGTA27685ACTACAGCGCTGACCTGCGTTTTTCTTGAGTATCAACAAAGCTTCCA
Kwoniella sp. CBS 6097 chromosome 1.
CP143074.1:4985412-4985428
GACCTATACCAGGACATTGTAGAATGTATG4985412ACTACAGCGCTGACCTGTTGACGTATATCCCCATTTCGCAGGAACAA
Kwoniella sp. CBS 9459 chromosome 1.
CP144065.1:10297546-10297562
ACCACTAGGAAAACAGCATCATAACGATCA10297546ACTACAGCGCTGACCTGGATAATTCTGGTACAATCAAGCCTTACGTT
Pseudomonas sp. R76 chromosome, complete genome.
CP019428.1:5866453-5866469
ACCAGAAAAACCAGCAGCAATACACCATCG5866453ACTACAGCGCTGACCTGGCTGAACAGATCAGCCTGAACATGGCCCTG
Streptomyces coeruleorubidus strain ATCC 13740 chromosome, complete genome.
CP023694.1:5903885-5903901
TCGTCGGCCGTGACGGCAAGCCCACCAAGA5903885ACTACAGCGCTGACCTGGCCGCCGTCTCGGGCCTGGGCAAGGGCAAG
Pseudomonas campi strain S1-A32-2 chromosome, complete genome.
CP053697.2:3098298-3098314
TCTGGCGTGCCAACGACGCGTACAACGCTG3098298ACTACAGCGCTGACCTGAACGACACCCGCCTGATCGTCGAGTACCCG
Alloalcanivorax xenomutans strain GOM8 chromosome, complete genome.
CP136538.1:293171-293187
AGGGCTGGCGGGTGAGTGCCGGAGACGGGG293171ACTACAGCGCTGACCTGGTGGTGGGCGCCGACGGTGCCCGCTCGCTG
Schistosoma mansoni strain Puerto Rico genome assembly, chromosome: 1.
HE601624.3:9929802-9929818
TCGAATCCCATCCAAGCACATTAACGGATG9929802ACTACAGCGCTGACCTGATGTATTTAGAACTCGATTTCGTTTGGAGT
Asterias rubens genome assembly, chromosome: 3.
LR699094.1:4222850-4222866
CTGTCTCTGTCTGCAGTCTCGGCATTCATA4222850ACTACAGCGCTGACCTGCAGCTCTCATCTGCTGATAATTTGTCACCA
Agonopterix subpropinquella genome assembly, chromosome: Z.
OV277693.1:23782515-23782531
GCCCTGCACGCACCCCTTTGTAGTGGGCTT23782515ACTACAGCGCTGACCTGCGTACATGACTGTCACTGTGCGGGCTGAGA
Agonopterix subpropinquella genome assembly, chromosome: 13.
OV277706.1:23635659-23635675
GCCCTGCACGCACCCCTTTCTAGTGGGCTT23635659ACTACAGCGCTGACCTGCGTACATGACTGTCACTGTGCGGCCTGAGA
Agonopterix subpropinquella genome assembly, chromosome: 25.
OV277718.1:13040130-13040146
GTGCTACCGGGCTGTCTTTGTAGTGGGCTT13040130ACTACAGCGCTGACCTGCGTACATGACTGTCACTGTGTGGCCTGAGA
Agonopterix arenella genome assembly, chromosome: Z.
OV656690.1:2919942-2919958
GCCCTGCACGCACCCCTTTGTAGTGGGCTT2919942ACTACAGCGCTGACCTGCGTACATCACCGTTACCGTGCGGCCTGAGA
Agonopterix arenella genome assembly, chromosome: Z.
OV656690.1:19080025-19080041
ACCCTGCACGCACCCCTTAGTAGTGGGCTT19080025ACTACAGCGCTGACCTGCGTACATCACCGTTACCGTGCGGCCTGAGA
Agonopterix arenella genome assembly, chromosome: 3.
OV656692.1:19280449-19280465
GCCCTGCACGCACCCCTTTGTAGTGGGCTT19280449ACTACAGCGCTGACCTGCGTACATCACCGTTACCGTGCGGCCTGAGA
Agonopterix arenella genome assembly, chromosome: 22.
OV656711.1:15154848-15154864
GCCCTGCACGCACCCCTTTGTAGTGGGCTT15154848ACTACAGCGCTGACCTGCGTACATCACCGTTACCGTGCGGCCTGAGA
Agonopterix arenella genome assembly, chromosome: 24.
OV656713.1:11666662-11666678
GCCCTGCACGCACCCCTTTGTAGTGGGCTT11666662ACTACAGCGCTGACCTGCGTACATCACCGTTACCGTGCGGCCTGAGA
Agonopterix arenella genome assembly, chromosome: 24.
OV656713.1:12346282-12346298
GCCCTGCACGCACCCCTTTGTAGTGGGCTT12346282ACTACAGCGCTGACCTGCGTACATCACCGTTACCGTGCGGCCTGAGA
Schistosoma rodhaini genome assembly, chromosome: 1.
OX103911.1:8096347-8096363
TCGAATCCCATCCAAGCACATTAACGGATG8096347ACTACAGCGCTGACCTGATGTATTTAGAACTCGATTTCGTTTGGAGT
Agonopterix heracliana genome assembly, chromosome: 10.
OY856317.1:7473858-7473874
GCCCTGCACGCACCCCTTTGTAGTGGGCTT7473858ACTACAGCGCTGACCTGCGTACATCACTGTTACTGTACGGCCTGAGA
Pyrrhia umbra genome assembly, chromosome: 24.
OY982941.1:7141022-7141038
TAATGCTGTGTTCGCGCTCGAAAGCGCGAG7141022ACTACAGCGCTGACCTGTGTGTTCCCTCCTCAGGACAAAAACAGAGG
Agonopterix alstromeriana genome assembly, chromosome: 21.
OZ004682.1:13492591-13492607
GCCCTGGACGCACCCCTTTGTAGTGGGCTT13492591ACTACAGCGCTGACCTGCGTACATCACTGTTACTGTGCGGCCTGAGA
Onychomys torridus genome assembly, chromosome: X.
LR877211.1:71454009-71454025
TGTACTGCCACTTGAGTCCATGGGGATGTC71454009CAGGTCAGCGCTGTAGTCAACGGCCATGTCTGTGGCCCAGCTATAGC
Onychomys arenicola genome assembly, chromosome: X.
OX460370.1:59549460-59549476
TGTACTGCCACTTGAGTCCATGGGGATGTC59549460CAGGTCAGCGCTGTAGTCAACGGCCATGTTTGTGGCCCAGCTATAGC
Onychomys arenicola genome assembly, chromosome: X.
OX460465.1:57032161-57032177
TGTACTGCCACTTGAGTCCATGGGGATGTC57032161CAGGTCAGCGCTGTAGTCAATGGCCATGTTTGTGGCCCAGCTATAGC
Onychomys torridus genome assembly, chromosome: X.
OX460905.1:35917116-35917132
TGTACTGCCACTTGAGTCCATGGGGATGTC35917116CAGGTCAGCGCTGTAGTCAACGGCCATGTCTGTGGCCCAGCTATAGC
Sylvilagus floridanus genome assembly, chromosome: 10.
OX463232.1:15355929-15355945
TGGGTGCCTTATTTGCATTAATTGACTCTG15355929CAGGTCAGCGCTGTAGTTATACCCAATTCACAGAAGAGGAGGCTGAA
Balaenoptera acutorostrata genome assembly, chromosome: 3.
OX465352.1:11342253-11342269
AGGTTGTGGGGAAATCAGTGACCTTCATTT11342253CAGGTCAGCGCTGTAGTCCATTTTAGGCACTCTCCCGGGTTTGCTAA
Betta splendens genome assembly, chromosome: 3.
LR132008.3:3488372-3488388
TCAAATCCGTGAGCAGTCACCTTTTAACAG3488372CAGGTCAGCGCTGTAGTTCACGCGTGCGTGTGGTTTAGGATTATTGT
Erpetoichthys calabaricus genome assembly, chromosome: 3.
LR536434.2:183007728-183007744
AACTTCTGTTAGAACGCGCCTGGTGGCGGA183007728CAGGTCAGCGCTGTAGTCCAGAGAGGAGGGCTGGGAGAGGACGACGC
Erpetoichthys calabaricus genome assembly, chromosome: 5.
LR536436.2:243697693-243697709
CTTCTCTGTCAGAACGCGCCTGGCAGCAGA243697693CAGGTCAGCGCTGTAGTCCAGAGAGGAGGGCTGGGAGAGGACGACAC
Salmo trutta genome assembly, chromosome: 10.
LR584419.1:14377473-14377489
ACTGGCAGGGAACAAAGATGAGATTGATGG14377473CAGGTCAGCGCTGTAGTAAAGCATTTATGTTTGACTGTTAGACCTCG
Telmatherina bonti genome assembly, chromosome: 1.
OW121821.1:26018557-26018573
TTCTTCTAACCCACACTAATGCTTCCTAAC26018557CAGGTCAGCGCTGTAGTGCATCATGCTATAAACCCCTTACAGTCTTG
Podarcis lilfordi genome assembly, chromosome: 10.
OX395135.1:17874475-17874491
TATCTATATCTATCTATCATCTTCCTATGG17874475CAGGTCAGCGCTGTAGTTTTGCTCACCTTTTGCTTAGGAACACCGCT
Gymnoscopelus braueri genome assembly, chromosome: 2.
OY725509.1:53743662-53743678
AACTGGATCGAAGGCACGACGTCTTCTCGT53743662CAGGTCAGCGCTGTAGTCAGGGTAGATGGACAGACGAGTCCCGTTAT
Gymnoscopelus braueri genome assembly, chromosome: 7.
OY725514.1:54485755-54485771
AACTGGATCGAAGGCACGACGTCTTCTCGT54485755CAGGTCAGCGCTGTAGTCAGGGTAGATGGACAGACGAGTCCCGTTAT
Labrus mixtus genome assembly, chromosome: 5.
OY757288.1:33052943-33052959
GCTCTTAAATGTCTTTCTGTCTGTTTTCTG33052943CAGGTCAGCGCTGTAGTTTTTGAATTCAAAGCTCACAAAATACTCGG
TSA: Penaeus monodon contig_75526.Pemomix mRNA sequence.
JR229676.1:1408-1424
AGCGCCGTTCATGTAGCGAGGGTGAGAAAA1408CAGGTCAGCGCTGTAGTACAGAGGCTTGATCCCGGTCTGCTTCTGCA
TSA: Hynobius retardatus mRNA, contig: comp3989317_c0_seq1.
LE362947.1:204-220
TAGGAATGCAGCAAGCTGACCTTGCACCCC204CAGGTCAGCGCTGTAGTTAACGCATGTTTTTTTCACCATCGGGCAGT
BOIEO43TR BO_1.4_1.6_KB_nuc Brassica oleracea genomic clone BOIEO43, genomic survey sequence.
CC959541.1:400-416
TGGAAGCTTTGTTGATACTCAAGAAAAACG400CAGGTCAGCGCTGTAGTTACCCTTAAAATTATGTAACTGCGTTATAA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' linkage group A10 clone KBrB119O22, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.
AC234732.1:126153-126169
TGGAAGCTTTGTTGATACTCAAGAAAAACG126153CAGGTCAGCGCTGTAGTTACCCTTAAAATTATGTAACTGCGTTATAA
Cenchrus purpureus cultivar elephant grass chromosome A2.
CP053455.1:53413600-53413616
GAAAAAAGGACGGTCGTCTAAACATACAGT53413600CAGGTCAGCGCTGTAGTTCCGTACATGCCATGGCGTAGAGAACAAGT
Wolffia australiana isolate 7733 chromosome 17.
CP092616.1:1613073-1613089
ATCTCAGACATTTTCTCCCTTCAGCTTATG1613073CAGGTCAGCGCTGTAGTGGATTCCTCATAATCGTGCTAATTATTTCT
Brassica napus cultivar Xiang5A chromosome 4.
CP123879.1:69523392-69523408
TGGAAGCTTTGTTGATACTCAAGAAAAACG69523392CAGGTCAGCGCTGTAGTTACCCTTAAAATTATGTAACTGCGTTATAA
Brassica napus genome assembly, chromosome: A09.
HG994363.1:53472864-53472880
TGGAAGCTTTGTTGATACTCAAGAAAAACG53472864CAGGTCAGCGCTGTAGTTACCCTTAAAATTATGTAACTGCGTTATAA
Brassica napus genome assembly, chromosome: C08.
HG994372.1:41640162-41640178
TGGAAGCTTTGTTGATACTCAAGAAAAACG41640162CAGGTCAGCGCTGTAGTTACCCTTAAAATTATGTAACTGCGTTATAA
Brassica rapa genome, scaffold: A09.
LR031568.1:57648840-57648856
TGGAAGCTTTGTTGATACTCAAGAAAAACG57648840CAGGTCAGCGCTGTAGTTACCCTTAAAATTATGTAACTGCGTTATAA
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:50877967-50877983
TGGAAGCTTTGTTGATACTCAAGAAAAACG50877967CAGGTCAGCGCTGTAGTTACCCTTAAAATTATGTAACTGCGTTATAA
Brassica rapa genome assembly, chromosome: A09.
LS974625.2:68172345-68172361
TGGAAGCTTTGTTGATACTCAAGAAAAACG68172345CAGGTCAGCGCTGTAGTTACCCTTAAAATTATGTAACTGCGTTATAA
Mycobacterium branderi JCM 12687 DNA, nearly complete genome.
AP022606.1:2502484-2502500
TCGAATCCCCTTAGCTCCACAAAGTTTGAG2502484CAGGTCAGCGCTGTAGTTCGCGCTCTCCCAGCCAGATTCCCACCGGT
Burkholderia pseudomallei strain VB29710 chromosome 1, complete sequence.
CP069360.1:2274721-2274737
GGTTCCGACTCATACTTTCCGCAGAGAGGG2274721CAGGTCAGCGCTGTAGTGGTTCAATGCCCTTGGACGGTTCGAAAAGA
Pseudomonas sp. SO81 chromosome, complete genome.
CP126126.1:3939641-3939657
CGGGTACTCGACGATCAGGCGGGTGTCGTT3939641CAGGTCAGCGCTGTAGTCAGCGTTGTAGGCATCGTTGGCACGCCAGA
Asterias amurensis isolate Qingdao Taiping Cape Park chromosome 5.
CP134956.1:23718966-23718982
TGGTGACAAATTATCAGCAGATGAGAGCTG23718966CAGGTCAGCGCTGTAGTTATGAATGCCGAGACTGCAGACAGAGACAG
Pecten maximus genome assembly, chromosome: 4.
LR736841.1:49227966-49227982
GTCTATTCCTGTTTTAAATCGATCATAATT49227966CAGGTCAGCGCTGTAGTATCTAAAATGGCAATAACGAACCAATTTAC
Apotomis turbidana genome assembly, chromosome: 16.
LR990296.1:12222962-12222978
AGCCTGAGGCGGCCCACGTTGCCGCTCCCG12222962CAGGTCAGCGCTGTAGTACAGCTGGTGCAACGCGCTCCGCCCTGCGA
Agonopterix subpropinquella genome assembly, chromosome: 3.
OV277696.1:84486-84502
GCTACTTCTCAGGCCGCACAGTCATGTACG84486CAGGTCAGCGCTGTAGTAAGCCCACTACAAAGGGGTGCGTGCAGGGC
Agonopterix arenella genome assembly, chromosome: Z.
OV656690.1:18292515-18292531
TCTCAGGCCGCACGGTAACGGTGATGTACG18292515CAGGTCAGCGCTGTAGTAAGCCCACTACAAAGGGGTGCGTGCAGGGC
Agonopterix arenella genome assembly, chromosome: 5.
OV656694.1:20008773-20008789
TCTCAGGCCGCACGGTAACGGTGATGTACG20008773CAGGTCAGCGCTGTAGTAAGCCCACTACAAAGGGGTGCGTGAAGGGC
Agonopterix arenella genome assembly, chromosome: 18.
OV656707.1:17580161-17580177
TCTCAGGCCGCACGGTAACGGTGATGTACG17580161CAGGTCAGCGCTGTAGTAAGCCCACTACAAAGGGGTGCGTGCAGGGC
Agonopterix arenella genome assembly, chromosome: 23.
OV656712.1:7576257-7576273
TCTCAGGCCGCACGGTAACGGTGATGTACG7576257CAGGTCAGCGCTGTAGTAAGCCCACTACAAAGGGGTGCGTGCAGGGC
Agonopterix arenella genome assembly, chromosome: 28.
OV656717.1:2044253-2044269
TCTCAGGCCGCACTGTAACGGTGATGTACG2044253CAGGTCAGCGCTGTAGTAAGCCCACTACAAAGAGGTGCGTGCAGGGC
Schistosoma rodhaini genome assembly, chromosome: 1.
OX104036.1:80442082-80442098
ACTCCAAACAAAATCGAGTTCTAAATACAT80442082CAGGTCAGCGCTGTAGTCATCCGTTAATGTGCTTGGATGGGATTCGA
Meconema thalassinum genome assembly, chromosome: 12.
OX336400.1:139004441-139004457
GCTGTTTGGACCCTCAAAAAGTACCGCCGT139004441CAGGTCAGCGCTGTAGTGAGGCGTACTAGGCAAGATGAGGGGTGAGG
Apotomis capreana genome assembly, chromosome: 16.
OX392514.1:12535207-12535223
AGCCTGAGGCGGCCCACGTTGCCGCTGCCG12535207CAGGTCAGCGCTGTAGTACAGCTGGTGCAACGCGCTCCGCCCTGCGA
Callimorpha dominula genome assembly, chromosome: 3.
OX456993.1:18038882-18038898
TAGTTAAATTATACAATACAACCACTGAGC18038882CAGGTCAGCGCTGTAGTCTAGATATATAAATAAACATGTCTATCTTT
Helicoverpa assulta genome assembly, chromosome: 13.
OY979787.1:225516-225532
GGTACAGCTATGTCATGAGGCGGGGACACG225516CAGGTCAGCGCTGTAGTCTCGCGCTTTCGAGCGCAGACGCAGAATTT
Agonopterix alstromeriana genome assembly, chromosome: Z.
OZ004661.1:4557362-4557378
TCTCAGGCCGCACAGTAACAGTGATGTACG4557362CAGGTCAGCGCTGTAGTAAGCCCACTACAAAGGGGTGCGTCCAGGGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTACAGCGCTGACCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTACAGCGCTGACCTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.420 | 0.411 | search_plus_done; http://172.18.8.135:50400/match?q=ACTACAGCGCTGACCTG&k=0&no_gap=0&offset=0&limit=50
0.735 | 0.316 | search_minus_done; http://172.18.8.135:50400/match?q=CAGGTCAGCGCTGTAGT&k=0&no_gap=0&offset=0&limit=15
0.765 | 0.030 | cgi_end;

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