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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:30:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH062_02021m, 5' end sequence.
AB450733.1:54-76
TTATTCCAACAGTCGTTTGTTCTCTTTCAT54ACTCAGATCGTACGCAGAACAAACTGCTGCTGCTGCTGCTGCTTCTTCTTCTT
Mdfw2001e09.x1 Mdfw Malus domestica cDNA clone Mdfw2001e09 3' similar to TR:O48597 O48597 CYCLIN-DEPENDENT KINASE INHIBITOR PROTEIN, mRNA sequence.
CN443868.1:81-103
TGTTATTCCAACTCGTTTGTTCTCTTTCAT81ACTCAGATCGTACGCAGAACAAACTGCTGCTGCTGCTTCTTCTTCTAAATTAA
Mdfwj2079C07_e22536.g1 Apple_EST_Mdfwj Malus domestica cDNA 5' similar to dbj|BAB20860.1| cyclin dependent kinase inhibitor [Pisum sativum], mRNA sequence.
GO561061.1:84-106
TGTTATTCCAACTCGTTTGTTCTCTTTCAT84ACTCAGATCGTACGCAGAACAAACTGCTGCTGCTGCTTCTTCTTCTAAATTAA
Mdfw2001E09_e12959.g1 Mdfw Malus domestica cDNA 5' similar to dbj|BAB20860.1| cyclin dependent kinase inhibitor [Pisum sativum], mRNA sequence.
GO567895.1:84-106
TGTTATTCCAACTCGTTTGTTCTCTTTCAT84ACTCAGATCGTACGCAGAACAAACTGCTGCTGCTGCTTCTTCTTCTAAATTAA
Pyrus pyrifolia mRNA, clone: NFW2_10_21, 5' end sequence, expressed in flower bud.
HX762795.1:70-92
TTATTCCAACAGTCGTTTGTTCTCTTTCAT70ACTCAGATCGTACGCAGAACAAACTGCTGCTGCTGCTGCTGCTTCTTCTTCTT
Pyrus pyrifolia mRNA, clone: NFW2_10_21, expressed in flower.
AK424213.1:54-76
TTATTCCAACAGTCGTTTGTTCTCTTTCAT54ACTCAGATCGTACGCAGAACAAACTGCTGCTGCTGCTGCTGCTTCTTCTTCTT
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141928.1:24146064-24146086
TGTTATTCCAACTCGTTTGTTCTCTTTCAT24146064ACTCAGATCGTACGCAGAACAAACTGCTGCTGCTGCTTCTTCTTCTAAATTAA
020902AARA012372HT (AARA) Royal Gala partially senescing leaf Malus domestica cDNA clone AARA012372, mRNA sequence.
CN877940.1:549-571
TTAATTTAGAAGAAGAAGCAGCAGCAGCAG549TTTGTTCTGCGTACGATCTGAGTATGAAAGAGAACAAACGAGTTGGAATAACA
TSA: Pyrus communis mRNA, contig: lc25062.
FX633444.1:466-488
GCTCTCCAAGTTAATTTAGAAGAAGAAGAN466TTTGTTCTGCGTACGATCTGAGTATGNGAGNCAAACGNCTGTTAGGAATAACA
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143376.1:13775152-13775174
TAGAAGAAGAAGCAGCAGCAGCAGCAGCAG13775152TTTGTTCTGCGTACGATCTGAGTATGAAAGAGAACAAACGACTGTTGGAATAA
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:13842102-13842124
AAGTTAATTTAGAAGAAGAAGCAGCAGCAG13842102TTTGTTCTGCGTACGATCTGAGTATGAAAGAGAACAAACGAGTTGGAATAACA
Malus domestica genome assembly, chromosome: 2.
OU696678.1:14081457-14081479
TTAATTTAGAAGAAGAAGCAGCAGCAGCAG14081457TTTGTTCTGCGTACGATCTGAGTATGAAAGAGAACAAACGAGTTGGAATAACA
Malus domestica genome assembly, chromosome: 2.
OU744543.1:14080467-14080489
AAGTTAATTTAGAAGAAGAAGCAGCAGCAG14080467TTTGTTCTGCGTACGATCTGAGTATGAAAGAGAACAAACGAGTTGGAATAACA
Malus domestica genome assembly, chromosome: 2.
OU744954.1:13636847-13636869
AAGTTAATTTAGAAGAAGAAGCAGCAGCAG13636847TTTGTTCTGCGTACGATCTGAGTATGAAAGAGAACAAACGAGTTGGAATAACA
Malus domestica genome assembly, chromosome: 2.
OU744992.1:14090007-14090029
TTAATTTAGAAGAAGAAGCAGCAGCAGCAG14090007TTTGTTCTGCGTACGATCTGAGTATGAAAGAGAACAAACGAGTTGGAATAACA
Pyrus communis genome assembly, chromosome: 10.
OY757077.1:10719658-10719680
TAGAAGAAGAAGAAGCAGCAGCAGCAGCAG10719658TTTGTTCTGCGTACGATCTGAGTATGAAAGAGAACAAACGACTGTTGGAATAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTCAGATCGTACGCAGAACAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTCAGATCGTACGCAGAACAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.497 | 0.488 | search_plus_done; http://172.18.8.135:50400/match?q=ACTCAGATCGTACGCAGAACAAA&k=0&no_gap=0&offset=0&limit=50
0.636 | 0.140 | search_minus_done; http://172.18.8.135:50400/match?q=TTTGTTCTGCGTACGATCTGAGT&k=0&no_gap=0&offset=0&limit=43
0.642 | 0.006 | cgi_end;

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