GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 17:57:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 1697 from patent US 10766935.
MV645092.1:683-706
ACTGTTTTGATGGAGTTACTTGGTTATGTT683TAGGATGAATGGATCCGGATGAGTTCAATAGATCAAAAGTGCTTTTATTAAATT
Sequence 1702 from patent US 10766935.
MV645097.1:666-689
TGTTTTGATGGAGTTACTTGGTTATATGTT666TAGGATGAATGGATCCGGATGAGTTCAATAGATGAAAAATGCTTTTATTAAATT
Sequence 1697 from patent US 11566053.
OS268571.1:683-706
ACTGTTTTGATGGAGTTACTTGGTTATGTT683TAGGATGAATGGATCCGGATGAGTTCAATAGATCAAAAGTGCTTTTATTAAATT
Sequence 1702 from patent US 11566053.
OS268576.1:666-689
TGTTTTGATGGAGTTACTTGGTTATATGTT666TAGGATGAATGGATCCGGATGAGTTCAATAGATGAAAAATGCTTTTATTAAATT
OPYF00774 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone 189-E9-T3.seq, mRNA sequence.
EL681684.1:643-666
ACTGTTTTGATGGAGTTACTTGGTTATGTT643TAGGATGAATGGATCCGGATGAGTTCAATAGATCAAAAGTGCTTTTATTAAATT
OPMF01352 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 5-B11-T3.seq, mRNA sequence.
EL685112.1:624-647
ACTGTTTTGATGGAGTTACTTGGTTATGTT624TAGGATGAATGGATCCGGATGAGTTCAATAGATCAAAAGTGCTTTTATT
OPSC00738 Elaeis guineensis Suspension cell cultures Elaeis guineensis cDNA clone 188-G7-T3.seq, mRNA sequence.
EL688973.1:622-645
ACTGTTTTGATGGAGTTACTTGGTTATGTT622TAGGATGAATGGATCCGGATGAGTTCAATAGATC
OPR00318 Elaeis guineensis root Elaeis guineensis cDNA clone PLATE205-D2-T3.seq, mRNA sequence.
EL690288.1:661-684
ACTGTTTTGATGGAGTTACTTGGTTATGTT661TAGGATGAATGGATCCGGATGAGTTCAATAGATCAAAAGTGCTTTTATTAAATT
OPR00694 Elaeis guineensis root Elaeis guineensis cDNA clone PLATE210-F11-T3.seq, mRNA sequence.
EL690663.1:381-404
ACTGTTTTGATGGAGTTACTTGGTTATGTT381TAGGATGAATGGATCCGGATGAGTTCAATAGATCAAAAGTGCTTTTATTAAC
pOP-CEO01808_EST_C_1_pSK_SK CEO (Oil Palm Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CEO01808 5', mRNA sequence.
EY397968.1:174-197
ACTGTTTTGATGGAGTTACTTGGTTATGTT174TAGGATGAATGGATCCGGATGAGTTCAATAGATCAAAAGTGCTTTTATTAAATT
pOP-CNI02080_EST_C_1_pSK_SK CNI (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNI02080 5', mRNA sequence.
EY403598.1:410-433
ACTGTTTTGATGGAGTTACTTGGTTATGTT410TAGGATGAATGGATCCGGATGAGTTCAATAGATCAAAAGTGCTTTTATTAAATT
pOP-EO06500_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO06500 5', mRNA sequence.
EY411795.1:653-676
ACTGTTTTGATGGAGTTACTTGGTTATGTT653TAGGATGAATGGATCCGGATGAGTTCAATAGATCAAAAGTGCTTTTATTAAATT
Elaeis guineensis EST, clone (6lib)_isotig14029.
LM619263.1:652-675
ACTGTTTTGATGGAGTTACTTGGTTATGTT652TAGGATGAATGGATCCGGATGAGTTCAATAGATCAAAAGTGCTTTTATTAAATT
TSA: Elaeis guineensis isotig11060.Elguifruit mRNA sequence.
JO098287.1:651-674
ACTGTTTTGATGGAGTTACTTGGTTATGTT651TAGGATGAATGGATCCGGATGAGTTCAATAGATCAAAA
Cocos nucifera beta-ketoacyl ACP synthase isoform 2 mRNA, 3' UTR.
EU143667.1:291-314
TGTTTTGATGGAGTTACTTGGTTATATGTT291TAGGATGAATGGATCCGGATGAGTTCAATAAAAAAAAAAAAAAAAAA
Elaeis guineensis 60S ribosomal protein l27 (RPL27) mRNA, complete cds.
KC146064.1:660-683
ACTGTTTTGATGGAGTTACTTGGTTATGTT660TAGGATGAATGGATCCGGATGAGTTCAATAGATCAAAAGTGCTTTTATTAAATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACTCATCCGGATCCATTCATCCTA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTCATCCGGATCCATTCATCCTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.099 | 0.090 | search_plus_done; http://172.18.8.135:50400/match?q=ACTCATCCGGATCCATTCATCCTA&k=0&no_gap=0&offset=0&limit=50
0.857 | 0.758 | search_minus_done; http://172.18.8.135:50400/match?q=TAGGATGAATGGATCCGGATGAGT&k=0&no_gap=0&offset=0&limit=50
0.868 | 0.011 | cgi_end;

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