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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:32:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KS12032C11 KS12 Capsicum annuum cDNA, mRNA sequence.
CA524065.1:227-246
CCGTAGCTCAACGCGATTGAGTACGTCGAC227GAACGACACCGTATGGGAGTGCGTGATTCCGTATATACAGGAATCACGTG
TSA: Capsicum annuum MGMT_Contig47655 mRNA sequence.
JW097899.1:363-382
CCGTAGCTCAACGCGATTGAGTACGTCGAC363GAACGACACCGTATGGGAGTGCGTGATTCCGTATATACAGGAATCACGTG
TSA: Capsicum annuum CM_MegaContig_8199 mRNA sequence.
JW100181.1:373-392
CCGTAGCTCAACGCGATTGAGTACGTCGAC373GAACGACACCGTATGGGAGTGCGTGATTCCGTATATACAGGAATCACGTG
Capsicum annuum Takanotsume DNA, chromosome 5, sequence.
AP026700.1:225934600-225934619
CCGTAGCTCAACGCGATTGAGTACGTCGAC225934600GAACGACACCGTATGGGAGTGCGTGATTCCGTATATACAGGAATCACGTG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 5.
CP124727.1:224376884-224376903
CCGTAGCTCAACGCGATTGAGTACGTCGAC224376884GAACGACACCGTATGGGAGTGCGTGATTCCGTATATACAGGAATCACGTG
Capsicum annuum var. annuum coronatine insensitive 1 (COI1) mRNA, complete cds.
JQ085403.1:433-452
CCGTAGCTCAACGCGATTGAGTACGTCGAC433GAACGACACCGTATGGGAGTGCGTGATTCCGTATATACAGGAATCACGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTCCCATACGGTGTCGTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTCCCATACGGTGTCGTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.173 | 0.164 | search_plus_done; http://172.18.8.135:50400/match?q=ACTCCCATACGGTGTCGTTC&k=0&no_gap=0&offset=0&limit=50
0.318 | 0.145 | search_minus_done; http://172.18.8.135:50400/match?q=GAACGACACCGTATGGGAGT&k=0&no_gap=0&offset=0&limit=50
0.322 | 0.004 | cgi_end;

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