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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-05 12:22:40, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Raphanus sativus var. sativus RNA, contig: WG3_13119.
FX668761.1:350-369
CGAACTTCGTTGGATGGATGCTTCCTAAGA350ACTCGATTCACATGCCTTCCAATATCAGTTTCCTGAAGAGCTTGGAATGT
TSA: Raphanus sativus RS16732 mRNA sequence.
JT801279.1:694-713
CGAACTTCGTTGGATGGATGCTTCCTAAGA694ACTCGATTCACATGCCTTCCAATATCAGTTTCCTGAAGAGCTTGGAATGT
Draba incana genome assembly, chromosome: 4.
OY755205.1:6643428-6643447
CTTCGAACATTGTTCGATGGATGCTTCCGA6643428ACTCGATTCACATGCCTTCCAATATCAGTTTCCTAAAGTTACCAAAAACC
Draba incana genome assembly, chromosome: 5.
OY755206.1:15884820-15884839
CTTCGAACATTGTTCGATGGATGCTTCCGA15884820ACTCGATTCACATGCCTTCCAATATCAGTTTCCTAAAGTTACCAAAAAAC
Arabis hirsuta genome assembly, chromosome: 2.
OZ053299.1:5075497-5075516
CTCCGAACATTGTTCGATGGATGCTTCCGA5075497ACTCGATTCACATGCCTTCCAATATCAGTTTCCTAAAGTTACCAAAAAAC
Arabis hirsuta genome assembly, chromosome: 5.
OZ053302.1:5488722-5488741
CTCCGAACATTGTTCGATGGATGCTTCCGA5488722ACTCGATTCACATGCCTTCCAATATCAGTTTCCTAAAGTTACCAAAAACC
Draba verna genome assembly, chromosome: 9.
OZ174226.1:3967027-3967046
CTCCGAACATTGTTCGATGGATGCTTCCGA3967027ACTCGATTCACATGCCTTCCAATATCAGTCTCCTAAATTCCCCAAAAACC
Raphanus sativus mRNA, clone: RSCS02N11, 5' end sequence.
FY446833.1:546-565
ACATTCCAAGCTCTTCAGGAAACTGATATT546GGAAGGCATGTGAATCGAGTTCTTAGGAAGCATCCATCCAACGAAGTTCG
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_20609.
FX794047.1:379-398
ACATTCCAAGCTCTTCAGGAAACTGATATT379GGAAGGCATGTGAATCGAGTTCTTAGGAAGCATCCATCCAACGAAGTTCG
Draba incana genome assembly, chromosome: 2.
OY755203.1:46567817-46567836
TGTTTTTGGTAACTTTAGGAAACTGATATT46567817GGAAGGCATGTGAATCGAGTTCGGAAGCATCCATCGAACAATGTTCGAAG
Draba incana genome assembly, chromosome: 12.
OY755213.1:18391065-18391084
GTTTCTCATGATGAGGTTAAAGCTGATATT18391065GGAAGGCATGTGAATCGAGTTCGGAAGCATCCATCGAACAATGTTCGAAG
Draba incana genome assembly, chromosome: 14.
OY755215.1:13762525-13762544
GGTTTTTGGTAACTTCAGGAAACAGATATT13762525GGAAGGCATGTGAATCGAGTTCAGAAGCATCCATCGAACAATGTTCGAAG
Draba verna genome assembly, chromosome: 10.
OZ174227.1:33954651-33954670
TTGTTATGGGAATTTTAGGAGACTGATATT33954651GGAAGGCATGTGAATCGAGTTCGGAAGCATCCATCGAACAATGTTCGGAG
Draba verna genome assembly, chromosome: 11.
OZ174228.1:34237371-34237390
GTTGTGTGGGAACTTTAGGAGACTGATATT34237371GGAAGGCATGTGAATCGAGTGCGGAAGCATCCATCCAACAATGTTCGGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTCGATTCACATGCCTTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTCGATTCACATGCCTTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.217 | 0.208 | search_plus_done; http://172.18.8.135:50900/match?q=ACTCGATTCACATGCCTTCC&k=0&no_gap=0&offset=0&limit=50
0.421 | 0.203 | search_minus_done; http://172.18.8.135:50900/match?q=GGAAGGCATGTGAATCGAGT&k=0&no_gap=0&offset=0&limit=43
0.426 | 0.005 | cgi_end;

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