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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:58:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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UA37BPH04.3pR Populus dormant cambium cDNA library Populus tremula cDNA clone UA37BPH04 3', mRNA sequence.
CK095946.1:354-373
AACAAATGCTTTGGTTTGAGTGTAGGAATA354ACTCTATCTGCCTCTCCACGTTTAGCATCCTTGTTCCTCTTTTTAGCAGA
WS02510.B21_D17 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02510_D17 3', mRNA sequence.
CV240748.1:425-444
AACAAATGCTTTGGTTTGAGTGTAGGAATA425ACTCTATCTGCCTCTCCACGTCTAGCATCCTTGTTCCTCTTTTTAGCAGA
WS0242.B21_J09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus deltoides cDNA clone WS0242_J09 3', mRNA sequence.
CV255980.1:370-389
AACAAATGCTTTGGTTTGAGTGTAGGAATA370ACTCTATCTGCCTCTCCACGTCTAGCATCCTTGTTCCTCTTTTTAGCAGA
WS0174.B21.1_J15 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides cDNA clone WS0174_J15 3', mRNA sequence.
CV274855.1:376-395
AACAAATGCTTTGGTTTGAGTGTAGGAATA376ACTCTATCTGCCTCTCCACGTCTAGCATCCTTGTTCCTCTTTTTAGCAGA
WS01918.C21_K05 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS01918_K05 3', mRNA sequence.
DT469706.1:373-392
AACAAATGCTTTGGTTTGAGTGTAGGAATA373ACTCTATCTGCCTCTCCACGTCTAGCATCCTTGTTCCTCTTTTTAGCAGA
L1P1B10R Fragaria x ananassa var. Elsanta red fruit ethylene treated library L1 Fragaria x ananassa cDNA clone L1P1B10R, mRNA sequence.
GT152036.1:279-298
AACAAATGCTTTGGTTTCATATTGGGAATA279ACTCTATCTGCCTCTCCACGTCTAGCATTCTTGTTTCTGTTCTTCACAGA
L1P1N24R Fragaria x ananassa var. Elsanta red fruit ethylene treated library L1 Fragaria x ananassa cDNA clone L1P1N24R, mRNA sequence.
GT152306.1:274-293
AACAAATGCTTTGGTTTCATATTGGGAATA274ACTCTATCTGCCTCTCCACGTCTAGCATTCTTGTTTCTGTTCTTCACAGA
ZDSB284F LIB-EST ZDSB (Zhenghe Dabaicha sprouting buds) Camellia sinensis subtractive cDNA library Camellia sinensis cDNA clone ZDSB284, mRNA sequence.
JZ495076.1:250-269
AACAAATGTTTTGGTTTCAGAGTGGGAATA250ACTCTATCTGCCTCTCCACGTCGGGCATCCTTGTTCCTCTTCTTGACAGA
Fragaria x ananassa cultivar Benihoppe chromosome 23.
CP139753.1:25699196-25699215
AACAAATGTTTTGGTTTCAAATTGGGAACA25699196ACTCTATCTGCCTCTCCACGTCTAGCATTCTTGTTTCTGTTCTTCACAGA
Fragaria x ananassa cultivar Benihoppe chromosome 22.
CP139754.1:27434628-27434647
AACAAATGTTTTGGTTTCAAATTGGGAACA27434628ACTCTATCTGCCTCTCCACGTCTAGCATTCTTGTTTCTGTTCTTCACAGA
Fragaria x ananassa cultivar Benihoppe chromosome 21.
CP139755.1:25781104-25781123
AACAAATGTTTTGGTTTCAAATTGGGAACA25781104ACTCTATCTGCCTCTCCACGTCTAGCATCCTTGTTTCTGTTCTTCACAGA
Fragaria x ananassa cultivar Benihoppe chromosome 21.
CP139755.1:25794141-25794160
AACAAATGTTTTGGTTTCAAATTGGGAACA25794141ACTCTATCTGCCTCTCCACGTCTAGCATTCTTGTTTCTGTTCTTCACAGA
Fragaria x ananassa cultivar Benihoppe chromosome 11.
CP139765.1:18900323-18900342
AACAAATGCTTTGGTTTCATATTGGGGATA18900323ACTCTATCTGCCTCTCCACGTCTAGCGTTCTTGTTTCTGTTCTTCACAGA
Fragaria x ananassa cultivar Benihoppe chromosome 10.
CP139766.1:19151192-19151211
AACAAATGCTTTGGTTTCATATTGGGAATA19151192ACTCTATCTGCCTCTCCACGTCTGGCGTTCTTGTTTCTGTTCTTCACAGA
Fragaria x ananassa cultivar Benihoppe chromosome 9.
CP139767.1:19808990-19809009
AACAAATGCTTTGGTTTCATATTGGGAATA19808990ACTCTATCTGCCTCTCCACGTCTAGCGTTCTTGTTTCTGTTCTTCACAGA
Comarum palustre genome assembly, chromosome: 17.
OX637588.1:17353711-17353730
AACAAGTGTTTTGGTTTCAAATTGGGAATA17353711ACTCTATCTGCCTCTCCACGTCTATCGTTCTTGTTTCTGTTCTTCACAGG
Populus nigra genome assembly, chromosome: 19.
OX637690.1:6538095-6538114
AACAAATGCTTTGGTTTGAGTGTAGGAATA6538095ACTCTATCTGCCTCTCCACGTCTAGCATCCTTGTTCCTCTTTTTAGCAGA
Viola odorata genome assembly, chromosome: 9.
OY829545.1:22968260-22968279
TACAAGTGCTTAGGTTTGAGTGTGGGAATA22968260ACTCTATCTGCCTCTCCACGGCGGGCCTCCTTATTCCTATTTCTAACAGA
Erodium maritimum genome assembly, chromosome: 1.
OY997588.1:46768843-46768862
TACAAATGCTTTGGCTTGAGAGTAGGGATG46768843ACTCTATCTGCCTCTCCACGGCGAGCCTCCTTGTTCCTATTCTTGATTGA
Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence.
CP040720.1:327607-327626
CATCTCGTTCCTGCTGATGATCCTGCTCTG327607ACTCTATCTGCCTCTCCACGAAGCGGCCCCCACCCGACGGTGGGGGCCGC
Rhodococcus rhodochrous strain LH-B3 plasmid unnamed1, complete sequence.
CP120357.1:273257-273276
CATCTCGTTCCTGCTGATGATCCTGCTCTG273257ACTCTATCTGCCTCTCCACGAAGCGGCCCCCACCCGACGGTGGGGGCCGC
Sequence 1145 from patent US 9551006.
KH513715.1:2051-2070
TCTGTGAAGAAGAGGAACAAGAATGCTCGG2051CGTGGAGAGGCAGATAGAGTCATTCCTACATTGAAACCAAAGCACTTATT
Sequence 1153 from patent US 9551006.
KH513723.1:2042-2061
TCTGTTAAAAAGAGGAATAAGGATGCTCGT2042CGTGGAGAGGCAGATAGAGTTATTCCTAGTCTTAAACCTAAGCACCTGTT
Sequence 1157 from patent US 9551006.
KH513727.1:1959-1978
TCTGCTAAAAAGAGGAACAAGGATGCTAGA1959CGTGGAGAGGCAGATAGAGTTATTCCTACACTCAAACCAAAGCATTTGTT
Sequence 1145 from patent US 10457952.
MO456891.1:2051-2070
TCTGTGAAGAAGAGGAACAAGAATGCTCGG2051CGTGGAGAGGCAGATAGAGTCATTCCTACATTGAAACCAAAGCACTTATT
Sequence 1153 from patent US 10457952.
MO456899.1:2042-2061
TCTGTTAAAAAGAGGAATAAGGATGCTCGT2042CGTGGAGAGGCAGATAGAGTTATTCCTAGTCTTAAACCTAAGCACCTGTT
Sequence 1157 from patent US 10457952.
MO456903.1:1959-1978
TCTGCTAAAAAGAGGAACAAGGATGCTAGA1959CGTGGAGAGGCAGATAGAGTTATTCCTACACTCAAACCAAAGCATTTGTT
T014A05 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence.
BU830859.1:375-394
TCTGCTAAAAAGAGGAACAAGGATGCTAAA375CGTGGAGAGGCAGATAGAGTTATTCCTACACTCAAACCAAAGCATTTGTT
T030C02 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence.
BU832169.1:139-158
TCTGCTAAAAAGAGGAACAAGGATGCTAAA139CGTGGAGAGGCAGATAGAGTTATTCCAACACTCAAACCAAAGCATTTGTT
PopSC00027 Poplar SC cDNA library Populus alba x Populus glandulosa cDNA clone PopSC00027, mRNA sequence.
CB176605.1:385-404
TCTGCTAAAAAGAGGAACAAGGATGCTAAA385CGTGGAGAGGCAGATAGAGTTATTCCTACACTCAAACCAAAGCATTTGTT
Populus EST from severe drought-stressed tension wood.
CU307769.1:10-29
GATGCTAAA10CGTGGAGAGGCAGATAGAGTTATTCCTACACTCAAACCAAAGCATTTGTT
Y252E02 Hevea brasiliensis YLX600 library Hevea brasiliensis cDNA clone Y252E02 5', mRNA sequence.
JG000966.1:351-370
TCTGTTAAAAAGAGGAATAAGGATGCTCGT351CGTGGAGAGGCAGATAGAGTTATTCCTACTCTCAAACCTAAGCACTTGTT
Y260B10 Hevea brasiliensis YLX600 library Hevea brasiliensis cDNA clone Y260B10 5', mRNA sequence.
JG001674.1:20-39
GGAGGATAAGGATGCTCGT20CGTGGAGAGGCAGATAGAGTTATTCCTACTCTCAAACCTAAGCACTTGTT
Y272A07 Hevea brasiliensis YLX600 library Hevea brasiliensis cDNA clone Y272A07 5', mRNA sequence.
JG002745.1:351-370
TCTGTTAAAAAGAGGAATAAGGATGCTCGT351CGTGGAGAGGCAGATAGAGTTATTCCTACTCTCAAACCTAAGCACTTGTT
Fo.06.B12 Hevea brasiliensis leaf cDNA library Hevea brasiliensis cDNA, mRNA sequence.
JZ541522.1:438-457
TCTGTTAAAAAGAGGAATAAGGATGCTCGT438CGTGGAGAGGCAGATAGAGTTATTCCTACTCTCAAACCTAAGCACTTGTT
TSA: Schima mertensiana mRNA, contig: Sm_c6993.
FX152570.1:805-824
TCTGTGACGAAGAGGAACAAGGATGCTCGA805CGTGGAGAGGCAGATAGAGTTATTCCTACTCTGAAACCAAAGCATCTGTT
TSA: Euphorbia fischeriana EFI_000310 mRNA sequence.
JL053337.1:2052-2071
TCTGTTAAAAAGAGGAATAAGGAAGCTCGT2052CGTGGAGAGGCAGATAGAGTTATTCCTACTCTGAGACCTAAGCACTTGTT
TSA: Cannabis sativa PK01447.1_1.CasaPuKu mRNA sequence.
JP449434.1:2129-2148
TCCACAAAGAAGAGGAACAAGAATGCACGT2129CGTGGAGAGGCAGATAGAGTGATCCCTACTCTGAAGCCAAAGCATTTGTA
TSA: Hevea brasiliensis Unigene16726_HB.Hebrbark mRNA sequence.
JR360906.1:192-211
TCTGTTAAAAAGAGGAATAAGGATGCTCGT192CGTGGAGAGGCAGATAGAGTTATTCCTACTCTCAAACCTAAGCACTTGTT
TSA: Hevea brasiliensis contig48313, mRNA sequence.
JT921329.1:2060-2079
TCTGTTAAAAAGAGGAATAAGGATGCTCGT2060CGTGGAGAGGCAGATAGAGTTATTCCTACTCTCAAACCTAAGCACTTGTT
TSA: Camellia sinensis tea_c13335 mRNA sequence.
KA292626.1:367-386
TCTGTCAAGAAGAGGAACAAGGATGCTCGA367CGTGGAGAGGCAGATAGAGTTATTCCCACTCTGAAACCAAAACATTTAGT
Euphorbia lathyris genome assembly, chromosome: 1.
OY755220.1:16763369-16763388
TCTGTTAGAAATAGGAATAAGGAAGCTCGT16763369CGTGGAGAGGCAGATAGAGTTATTCCTACTCTCAGACCTAAGCACTTGTT
Narthecium ossifragum genome assembly, chromosome: 6.
OY986968.1:876546-876565
TCTGTGAAGATGAGAAACAAGGATGCTCGT876546CGTGGAGAGGCAGATAGAGTCATTCCTAACTTGAAGCCGAAGCACTTGTA
Geranium rotundifolium genome assembly, chromosome: 9.
OY987319.1:32135923-32135942
TCAGTCAAAAATAGGAACAAGGAGGCTCGT32135923CGTGGAGAGGCAGATAGAGTCATCCCTACCCTCAAACCAAAGCATTTGTA
Rhodococcus sp. RDE2 plasmid pRDE01 DNA, complete genome.
AP025187.1:93947-93966
GCGGCCCCCACCGTCGGGTGGGGGCCGCTT93947CGTGGAGAGGCAGATAGAGTCAGAGCAGGATCATCAGCAGGAACGAGATG
Rhodococcus pyridinivorans strain YC-JH2 plasmid pRJH1, complete sequence.
CP050179.1:154566-154585
GCGGCCCCCACCGTCGGGTGGGGGCCGCTT154566CGTGGAGAGGCAGATAGAGTCAGAGCAGGATCATCAGCAGGAACGAGATG
Rhodococcus pyridinivorans strain 5Ap plasmid pSID, complete sequence.
CP063453.1:33737-33756
GCGGCCCCCACCGTCGGGTGGGGGCCGCTT33737CGTGGAGAGGCAGATAGAGTCAGAGCAGGATCATCAGCAGGAACGAGATG
Rhodococcus sp. PD04 plasmid unnamed2, complete sequence.
CP142145.1:76824-76843
GCGGCCCCCACCGTCGGGTGGGGGCCGCTT76824CGTGGAGAGGCAGATAGAGTCAGAGCAGGATCATCAGCAGGAACGAGATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTCTATCTGCCTCTCCACG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTCTATCTGCCTCTCCACG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.876 | 0.867 | search_plus_done; http://172.18.8.135:50400/match?q=ACTCTATCTGCCTCTCCACG&k=0&no_gap=0&offset=0&limit=50
1.898 | 1.022 | search_minus_done; http://172.18.8.135:50400/match?q=CGTGGAGAGGCAGATAGAGT&k=0&no_gap=0&offset=0&limit=29
1.915 | 0.018 | cgi_end;

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