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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:50:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 168617 from Patent EP2090662.
HB819403.1:1264-1286
CTTTGGGCAGGGCTTATCATTGGATTTGTC1264ACTGAATACTATACCAGCAATGCATACAGTCCTGTGCAAGATGTTGCAGACTC
Sequence 1635 from patent US 9551006.
KH514205.1:1392-1414
CTTTGGGCAGGGCTTATCATTGGATTTGTC1392ACTGAATACTATACCAGCAATGCATACAGTCCTGTGCAAGATGTTGCAGACTC
Sequence 1700 from patent US 9551006.
KH514270.1:1360-1382
CTATGGGCTGGTCTAATTATTGGGTTTGTG1360ACTGAATACTATACCAGCAATGCATATAGTCCCGTGCAAGATGTTGCCGATTC
Sequence 1635 from patent US 10457952.
MO457381.1:1392-1414
CTTTGGGCAGGGCTTATCATTGGATTTGTC1392ACTGAATACTATACCAGCAATGCATACAGTCCTGTGCAAGATGTTGCAGACTC
Sequence 1700 from patent US 10457952.
MO457446.1:1360-1382
CTATGGGCTGGTCTAATTATTGGGTTTGTG1360ACTGAATACTATACCAGCAATGCATATAGTCCCGTGCAAGATGTTGCCGATTC
Antirrhinum majus EST, clone 018_1_03_g09.
AJ787814.1:201-223
CTTTGGGCTGGGCTTATCATTGGATTTGTG201ACTGAATACTATACCAGCAATGCATATAGCCCTGTGCAAGATGTTGCCGATTC
NF047C04ST1F1000 Developing stem Medicago truncatula cDNA clone NF047C04ST 5', mRNA sequence.
AW691630.2:236-258
CTTTGGGCAGGGCTTATCATTGGATTTGTC236ACTGAATACTATACCAGCAATGCATACAGTCCTGTGCAAGATGTTGCAGACTC
Trifolium pratense cDNA clone:RCE03431.
BB905359.1:323-345
CTTTGGGCAGGGCTCATCATTGGATTTGTT323ACTGAATACTATACCAGCAATGCATACAGTCCCGTGCAAGATGTTGCCGACTC
Trifolium pratense cDNA clone:RCE12564.
BB913198.1:524-546
CTTTGGGCAGGGCTCATCATTGGATTTGTT524ACTGAATACTATACCAGCAATGCATACAGTCCCGTGCAAGATGTTGCCGACTC
s13dNF57H08MJ073_247292 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence.
CX530638.1:569-591
CTTTGGGCAGGGCTTATCATTGGATTTGTC569ACTGAATACTATACCAGCAATGCATACAGTC
s13dNF0QH12MJ096_321020 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence.
CX533871.1:369-391
CTTTGGGCAGGGCTTATCATTGGATTTGTC369ACTGAATACTATACCAGCAATGCATACAGTCCTGTGCAAGATGTTGCAGACTC
s13dNF0IG07GS052_460702 Germinating Seed Medicago truncatula cDNA, mRNA sequence.
CX538725.1:7-29
TTTGTC7ACTGAATACTATACCAGCAATGCATACAGTCCTGTGCAAGATGTTGCAGACTC
EST1226731 MTY Medicago truncatula cDNA clone MTYAX85, mRNA sequence.
DW017770.1:530-552
CTTTGGGCAGGGCTTATCATTGGATTTGTC530ACTGAATACTATACCAGCAATGCATACAGTCCTGTGCAAGATGTTGCAGACTC
Petunia x hybrida EST, clone drs21P0009L06_F.ab1 2007-08-10.
FN044997.1:310-332
TTGTGGGCCGGGCTTATTATTGGGTTCGTC310ACTGAATACTATACCAGCAATGCTTACAGCCCTGTGCAAGATGTTGCTGATTC
TSA: Lens culinaris contig02472.Lecu mRNA sequence.
JI848744.1:1309-1331
CTTTGGGCAGGGCTTATCATTGGATTTGTT1309ACTGAATACTATACCAGCAATGCATACAGCCCCGTGCAAGATGTTGCTGATTC
TP_ABb0013E12.f TP_ABb Trifolium pratense genomic clone TP_ABb0013E12 5', genomic survey sequence.
HR260183.1:489-511
CTTTGGGCAGGGCTCATCATTGGATTCGTT489ACTGAATACTATACCAGCAATGCATACAGGTAAGCAATTATGGATTGTATTTT
TP_ABb0024I10.r TP_ABb Trifolium pratense genomic clone TP_ABb0024I10 3', genomic survey sequence.
HR268083.1:503-525
TTTGGGCAGGGCTCATCATTGGATTCGTTT503ACTGAATACTATACCAGCAATGCATACAGGTAAGCAAATTATGGATT
Medicago truncatula chromosome 8 clone mth2-32k10, complete sequence.
AC151744.23:42027-42049
CTTTGGGCAGGGCTTATCATTGGATTTGTC42027ACTGAATACTATACCAGCAATGCATACAGGTAAGCAATCATGGATTCATATTT
Trifolium repens isolate ACLI19 chromosome 08_0cc.
CP125850.1:56656992-56657014
CTTTGGGCAGGGCTTATCATTGGATTTGTT56656992ACTGAATACTATACCAGCAATGCATACAGGTAAGCAATTATGGATCGTATTTT
Trifolium repens isolate ACLI19 chromosome 08_Pall.
CP125851.1:48999289-48999311
CTTTGGGCAGGGCTTATCATTGGTTTTGTT48999289ACTGAATACTATACCAGCAATGCATACAGGTAAGCAATTATGGATCATATTTT
Medicago truncatula vacuolar-type H-pyrophosphatase (VP1) mRNA, complete cds.
FJ176929.1:1264-1286
CTTTGGGCAGGGCTTATCATTGGATTTGTC1264ACTGAATACTATACCAGCAATGCATACAGTCCTGTGCAAGATGTTGCAGACTC
Trifolium repens cultivar Ladino vacuolar-type H-pyrophosphatase (VP1) mRNA, complete cds.
KY983355.1:1340-1362
CTTTGGGCAGGGCTTATCATTGGATTTGTT1340ACTGAATACTATACCAGCAATGCATACAGTCCTGTGCAAGATGTTGCAGACTC
Trifolium repens vacuolar pyrophosphatase (VP1) mRNA, partial cds.
MF405364.1:1264-1286
CTTTGGGCAGGGCTTATCATTGGTTTTGTT1264ACTGAATACTATACCAGCAATGCATACAGTCCTGTGCAAGATGTTGCAGACTC
Medicago truncatula EST, clone MtNF03O15N2.
AJ845414.1:102-124
GAGTCTGCAACATCTTGCACAGGACTGTAT102GCATTGCTGGTATAGTATTCAGTGACAAATCCAATGATAAGCCCTGCCCAAAG
EST510355 HOGA Medicago truncatula cDNA clone pHOGA-23N7 5' end, mRNA sequence.
BG648736.1:91-113
AAATATGAATCCATGATTGCTTACCTGTAT91GCATTGCTGGTATAGTATTCAGTGACAAATCCAATGATAAGCCCTGCCCAAAG
TE.002F14F011204 TE Pisum sativum cDNA clone TE002F14, mRNA sequence.
CD860406.1:188-210
GAATCAGCAACATCTTGCACAGGGCTGTAT188GCATTGCTGGTATAGTATTCAGTAACAAATCCAATGATAAGCCCTGCCCAAAG
Petunia x hybrida EST, clone drs21P0009L06_R.ab1 2007-08-10.
FN044998.1:150-172
GAATCAGCAACATCTTGCACAGGGCTGTAA150GCATTGCTGGTATAGTATTCAGTGACGAACCCAATAATAAGCCCGGCCCACAA
TSA: Pisum sativum Ps_contig_mira-ass_1741 mRNA sequence.
JI898583.1:665-687
GAATCAGCAACATCTTGCACAGGGCTGTAT665GCATTGCTGGTATAGTATTCAGTAACAAATCCAATGATAAGCCCTGCCCAAAG
TSA: Medicago sativa subsp. falcata cultivar Wisfal FZ0_152 mRNA sequence.
JL881357.1:905-927
GAGTCTGCAACATCTTGCACAGGACTGTAT905GCATTGCTGGTATAGTATTCAGTAACAAATCCAATGATAAGCCCTGCCCAAAG
TSA: Pisum sativum contig03651.PisaPYK9 mRNA sequence.
JR954350.1:294-316
GAATCAGCAACATCTTGCACAGGGCTGTAT294GCATTGCTGGTATAGTATTCAGTAACAAATCCAATGATAAGCCCTGCCCAAAG
XXX.
LR721783.1:23636376-23636398
CATAGCCAATTGGTAAACTCTTACCTGTAA23636376GCATTGCTGGTATAGTATTCAGTTGTATATCCAATGGAAAGGCCTGCCCATAA
XXX.
LR721783.1:23662789-23662811
CAGAACCAATTGGTAAACTCTTACCTGTAA23662789GCATTGCTGGTATAGTATTCAGTTGTATATCCAATGGCAAGGCCTGCCCATAA
Trifolium subterraneum genome assembly, chromosome: 4.
OX637464.1:7412750-7412772
AAAATACAATCCACAATTGCTTACCTGTAT7412750GCATTGCTGGTATAGTATTCAGTGACAAATCCAATGATAAGACCAGCCCAAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTGAATACTATACCAGCAATGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTGAATACTATACCAGCAATGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.861 | 0.852 | search_plus_done; http://172.18.8.135:50400/match?q=ACTGAATACTATACCAGCAATGC&k=0&no_gap=0&offset=0&limit=50
1.162 | 0.301 | search_minus_done; http://172.18.8.135:50400/match?q=GCATTGCTGGTATAGTATTCAGT&k=0&no_gap=0&offset=0&limit=27
1.168 | 0.007 | cgi_end;

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