GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 10:30:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392552.1:40470279-40470298
GTGGCATCAGGCTCAGAGGAGTCACCCTTG40470279GAAGGCCAACCTGATTCAGTCACTACAACAGGGACATTGGTGAAGTTTAG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392561.1:40656449-40656468
GTGGCATCAGGCTCAGAGGAGTCACCCTTG40656449GAAGGCCAACCTGATTCAGTCACTACAACAGGGACATTGGTGAAGTTTAG
Chenopodium album genome assembly, chromosome: 1.
OX419208.1:61164293-61164312
GTGGCATCAGGCTCAGATGAGTCACCCTTT61164293GAAGGCCAACCTGATTCAGTCACAATAACAGGGACATTGGTGAAGTTTAG
Chenopodium album genome assembly, chromosome: 10.
OX419217.1:22956479-22956498
GTGGCATCAGGCTCAGATGAGTCACCCTTG22956479GAAGGCCAACCTGATTCAGTCACAATAACAGGGACATTGGTGAAGTTTAG
Chenopodium album genome assembly, chromosome: 21.
OX419228.1:17307952-17307971
GTGGCATCAGGCTCAGATGAGTCACCCTTG17307952GAAGGCCAACCTGATTCAGTCACAATAACAGGGACATTGGTGAAGTTTAG
Sambucus nigra genome assembly, chromosome: 3.
OX422209.1:327150666-327150685
CTAGCATCTGGCTCAGACGAGTCACCCCTA327150666GAAGGCCAACCTGATTCAGTCACTGTGATGGGTATATTGGTGAAATTTAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACTGAATCAGGTTGGCCTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTGAATCAGGTTGGCCTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.324 | 0.315 | search_plus_done; http://172.18.8.135:50400/match?q=ACTGAATCAGGTTGGCCTTC&k=0&no_gap=0&offset=0&limit=50
0.404 | 0.081 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGGCCAACCTGATTCAGT&k=0&no_gap=0&offset=0&limit=50
0.408 | 0.004 | cgi_end;

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