GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-03-04 23:21:25, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium pratense DNA, clone:RCG01032.
DE246687.1:30-49
GGTAAGTGTAGTTTAGATGTTATGCTATC30ACTGCGTTTGTTGCTCCTCTTATTGTTATCTTATTGTTATTGGTTGTGGA
jld0003dB04.f TP__Sa Trifolium pratense genomic clone jld0003dB04 5', genomic survey sequence.
JJ944356.1:217-236
TGGTAAGTGTAGTTTAGATGTTATGCTATC217ACTGCGTTTGTTGCTCCTCTTATTGTTATCTTATTGTTATTGGTTGTGGA
Breviolum minutum genome assembly, chromosome: 9.
OZ285603.1:10864892-10864911
ACTAAATGTCTGGACGTCCCAATCCGTTTC10864892ACTGCGTTTGTTGCTCCTCTGCTGTTTGTCTTTCTCCCACACCTACGTCA
Breviolum minutum genome assembly, chromosome: 13.
OZ285607.1:4073527-4073546
ACTAAATGTCTGGACGTCCCAATCCGTTTC4073527ACTGCGTTTGTTGCTCCTCTGCTGTTTGTCTTTCTCCCACACCTACGTCA
Breviolum minutum genome assembly, chromosome: 35.
OZ285629.1:3952191-3952210
ACTAAATGTCTGGACGTCCCAATCCGTTTC3952191ACTGCGTTTGTTGCTCCTCTGCTGTTTGTCTTTCTCCCACACCTACGTCA
Isturgia murinaria genome assembly, chromosome: 24.
OZ219398.1:2678122-2678141
TTCTCCTTTTCGAACTTCTCCTTCTCTTTG2678122ACTGCGTTTGTTGCTCCTCTGTAAGAAGAAAGAAAGAAGTTTGTCGTCAC
Grammodes bifasciata genome assembly, chromosome: 24.
OZ253631.1:18227822-18227841
ATCGTCAATTATTGTCATGGGGATTAGTCC18227822ACTGCGTTTGTTGCTCCTCTTGGTCATCGTTATGTGACTACTTTGGTCTA
Trifolium pratense DNA, clone:RCG01630.
DE213412.1:232-251
TCCACAACCAATAACAATAAGATAACAATA232AGAGGAGCAACAAACGCAGTGATAGCATAACATCTAAACTACACTTACC
Trifolium pratense DNA, clone:RCG01758.
DE213513.1:232-251
TCCACAACCAATAACAATAAGATAACAATA232AGAGGAGCAACAAACGCAGTGATAGCATAACATCTAAACTACACTTACC
Trifolium pratense DNA, clone:RCG03504.
DE214911.1:232-251
TCCACAACCAATAACAATAAGATAACAATA232AGAGGAGCAACAAACGCAGTGATAGCATAACATCTAAACTACACTTACC
Trifolium pratense DNA, clone:RCG04162.
DE215463.1:232-251
TCCACAACCAATAACAATAAGATAACAATA232AGAGGAGCAACAAACGCAGTGATAGCATAACATCTAAACTACACTTACC
Trifolium pratense DNA, clone:RCG04454.
DE215704.1:232-251
TCCACAACCAATAACAATAAGATAACAATA232AGAGGAGCAACAAACGCAGTGATAGCATAACATCTAAACTACACTTACC
Trifolium pratense DNA, clone:RCG01040.
DE246691.1:232-251
TCCACAACCAATAACAATAAGATAACAATA232AGAGGAGCAACAAACGCAGTGATAGCATAACATCTAAACTACACTTACC
Breviolum minutum genome assembly, chromosome: 73.
OZ285667.1:623891-623910
TGACGTAGGTGTGGGAGAAAGACAAACAGC623891AGAGGAGCAACAAACGCAGTGAAACGGATTGGGACGTCCAGACATTTAGT
Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 2, sequence.
AP039583.1:3951127-3951146
ATGCTTTAAACATTTTCAATGTTGGGGCGG3951127AGAGGAGCAACAAACGCAGTGCAGGAAAACCGTAGCCATGCAACTGAATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTGCGTTTGTTGCTCCTCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTGCGTTTGTTGCTCCTCT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.289 | 0.280 | search_plus_done; http://172.18.8.135:50900/match?q=ACTGCGTTTGTTGCTCCTCT&k=0&no_gap=0&offset=0&limit=50
0.515 | 0.226 | search_minus_done; http://172.18.8.135:50900/match?q=AGAGGAGCAACAAACGCAGT&k=0&no_gap=0&offset=0&limit=43
0.520 | 0.006 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).