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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 03:39:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mus musculus BAC clone RP24-206C4 from chromosome 12, complete sequence.
AC159628.2:80143-80162
GCAGACCACTGGTTGAAGGTTGGCCATGGT80143ACTGCTACTGCAGAGGTTGGAGAATGCCAGACTAGAAGTTCATATTAAGA
Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Sntg2:tm2a(KOMP)Wtsi; transgenic.
JN946146.1:22434-22453
GCAGACCACTGGTTGAAGGTTGGCCATGGT22434ACTGCTACTGCAGAGGTTGGAGAATGCCAGACTAGAAGTTCATATTAAGA
Mus musculus targeted non-conditional, lacZ-tagged mutant allele Sntg2:tm1e(KOMP)Wtsi; transgenic.
JN946147.1:20944-20963
GCAGACCACTGGTTGAAGGTTGGCCATGGT20944ACTGCTACTGCAGAGGTTGGAGAATGCCAGACTAGAAGTTCATATTAAGA
Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Sntg2:tm3a(KOMP)Wtsi; transgenic.
JN950039.1:22434-22453
GCAGACCACTGGTTGAAGGTTGGCCATGGT22434ACTGCTACTGCAGAGGTTGGAGAATGCCAGACTAGAAGTTCATATTAAGA
Lotus japonicus genomic DNA, chromosome 2, clone: LjT01H08, TM0053.
AP009650.1:58612-58631
CCATATTAATTAATTTACACAACTAAACTA58612ACTGCTACTGCAGAGGTTGGAGAGGCAGGATGTGATCAAAACTCTTCAGA
Alisma plantago-aquatica genome assembly, chromosome: 1.
OY856409.1:385149274-385149293
TAGACAGTACCTATTATGGCATCCTGCTCT385149274ACTGCTACTGCAGAGGTTGGGAGTAATCCTGTAGACCCACCAACTAGCAC
Alisma plantago-aquatica genome assembly, chromosome: 1.
OY856409.1:1676175239-1676175258
TCTCAGACTGCCACTTACCAGACAATACCT1676175239ACTGCTACTGCAGAGGTTGGGAGTAATCCTGTAGAACCACCACCTAGCAC
Alisma plantago-aquatica genome assembly, chromosome: 2.
OY856410.1:1162702240-1162702259
ACTCAGATAGTACCTATGGCGTCCCACTCT1162702240ACTGCTACTGCAGAGGTTGGGAGTAATCTTGTAGACCCACCACCTAGCAC
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:192374496-192374515
CAGACAGTACCTATCATAGCATCCCGCTCT192374496ACTGCTACTGCAGAGGTTGGGAGTAATCCTATAGACCCACCACCTAGCAC
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:363402879-363402898
CAGACAATACCTACCGCAGACTCTACTCCT363402879ACTGCTACTGCAGAGGTTGGGAGTAATCCTATAGAACCACCACCTAGCAC
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:457461182-457461201
ACTCAGTAGACAGTACCTACGTCCCGCTCT457461182ACTGCTACTGCAGAGGTTGGGAGTAGTAGTTCTGTAGACCCACCACCTAG
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:826322181-826322200
ACTCAGACAGTACATATGGTGTTCCGCTCT826322181ACTGCTACTGCAGAGGTTGGGAGTAATCCTATAGGCCCACCACCGAGCAC
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:1186769692-1186769711
TACCAGACAGTACCTGTGGCGTCTCGCTCT1186769692ACTGCTACTGCAGAGGTTGGGAGTAATCCTATAGACCCACCACCTAGAAC
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:1376720426-1376720445
ACAATACCTATAGCTCCTATGGCAGGCTCT1376720426ACTGCTACTGCAGAGGTTGGGAGTAATCCTGTAGACCCAACACCTAACAC
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:1457896867-1457896886
ACGGTACCTGTGACGTACCGCACTTCTATT1457896867ACTGCTACTGCAGAGGTTGGGAGTAATCCTGTACACCCACCACCTAACAC
Mus musculus genome assembly, chromosome: 12.
OW971555.1:23282018-23282037
TCTTAATATGAACTTCTAGTCTGGCATTCT23282018CCAACCTCTGCAGTAGCAGTACCATGGCCAACCTTCAACCAGTGGTCTGC
Mus musculus molossinus genome assembly, chromosome: 12.
OW971669.1:29592481-29592500
TCTTAATATGAACTTCTAGTCTGGCATTCT29592481CCAACCTCTGCAGTAGCAGTACCATGGCCAACCTTCAACCAGTGGTCTGC
Mus spretus genome assembly, chromosome: 12.
OW971692.1:24283869-24283888
TCTTAATATGAACTTCTAGTCTGGCATTCT24283869CCAACCTCTGCAGTAGCAGTACCATGGCCAACCTTCAACCAGTGGTCTGC
Mus musculus castaneus genome assembly, chromosome: 12.
OW971828.1:23665822-23665841
TCTTAATATGAACTTCTAGTCTGGCATTCT23665822CCAACCTCTGCAGTAGCAGTACCATGGCCAACCTTCAACCAGTGGTCTGC
Mus musculus genome assembly, chromosome: 12.
OX439027.1:30093369-30093388
TCTTAATATGAACTTCTAGTCTGGCATTCT30093369CCAACCTCTGCAGTAGCAGTACCATGGCCAACCTTCAACCAGTGGTCTGC
Xenopus laevis cDNA clone:XL152l11, 5' end, single read.
BJ096113.1:1-20
1CCAACCTCTGCAGTAGCAGTACTGACCCCGTAATGACCAAAGGCCAGGAG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:62478890-62478909
TCTGAAGAGTTTTGATCACATCCTGCCTCT62478890CCAACCTCTGCAGTAGCAGTTAGTTTAGTTGTGTAAATTAATTAATATGG
Alisma plantago-aquatica genome assembly, chromosome: 1.
OY856409.1:1121662217-1121662236
ATGCTAGGTGGTGGGTCTATAGGATTACTC1121662217CCAACCTCTGCAGTAGCAGTAGGAGAAGAGCGGCACGCCACAGGTACCGT
Alisma plantago-aquatica genome assembly, chromosome: 1.
OY856409.1:1297128058-1297128077
GTGCTAGGTGGTGGTTCTACAGGATTACTC1297128058CCAACCTCTGCAGTAGCAGTAGGAGTAGAGTCTGCAGTAGGTATTGTCTG
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:814787780-814787799
GTGCTAGGTGGTGGGTCTACAGGATTACTC814787780CCAACCTCTGCAGTAGCAGTAGAGCATACAGTAGGAGCTATAGGTACTGT
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:903396505-903396524
GTGCTAGGTGGTGGGTCTACTCGATTACTC903396505CCAACCTCTGCAGTAGCAGTAGAGCAGGACGTCATAGGTATTGTCTGCTG
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:1082652038-1082652057
GTGCTAGGTGGTGGTTCTACAGGATTACTC1082652038CCAACCTCTGCAGTAGCAGTAGGAGGAGTAGAGCCTGCAGTAGGTACTAT
Alisma plantago-aquatica genome assembly, chromosome: 7.
OY856415.1:527469186-527469205
GTGCTAGGTGTTGGGTCTACATGATTACTC527469186CCAACCTCTGCAGTAGCAGTACAGCGGGACGCCATAGGTACTATCTGCTG
Icerya purchasi genome assembly, chromosome: 2.
OX731681.1:412179524-412179543
TTTTACTTTCCATCCACTGAGAACGGAGAA412179524CCAACCTCTGCAGTAGCAGTTATAAAGCTAAACAGTGATTATCTTTTCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTGCTACTGCAGAGGTTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTGCTACTGCAGAGGTTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.178 | 0.170 | search_plus_done; http://172.18.8.135:50400/match?q=ACTGCTACTGCAGAGGTTGG&k=0&no_gap=0&offset=0&limit=50
0.308 | 0.129 | search_minus_done; http://172.18.8.135:50400/match?q=CCAACCTCTGCAGTAGCAGT&k=0&no_gap=0&offset=0&limit=35
0.317 | 0.009 | cgi_end;

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