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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 17:19:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EST683029 normalized cDNA library of onion Allium cepa cDNA clone ACAIC49, mRNA sequence.
CF446684.1:267-286
AATCATATTATTTATGAAGCAGAGAAGATG267ACTGGACGCAAATTTTCTGGCTAGAGTTGCAATAGTATTGGCATGCATCC
TSA: Allium cepa CUDHLF2_6420 mRNA sequence.
JR849238.1:435-454
AATCATATTATTTATGAAGCAGAGAAGATG435ACTGGACGCAAATTTTCTGGCTAGAGTTGCAATAGTATTGGCATGCATCC
Triticum aestivum genome assembly, chromosome: 7A.
LR877327.1:10452414-10452433
CACGTTTTGATGATGTTTAACAATTCGGGC10452414ACTGGACGCAAATTTTCTGGAAATTACAGCAAGATCAAATAACTATCATC
Digitaria exilis genome assembly, chromosome: 3B.
LR994609.1:36896628-36896647
TGTAAGTCTAGTCTCAACATTCTTTCTTAT36896628CCAGAAAATTTGCGTCCAGTAATCTTCTCGGACTCGTACAGAATATGATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTGGACGCAAATTTTCTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTGGACGCAAATTTTCTGG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.378 | 0.369 | search_plus_done; http://172.18.8.135:50400/match?q=ACTGGACGCAAATTTTCTGG&k=0&no_gap=0&offset=0&limit=50
0.486 | 0.109 | search_minus_done; http://172.18.8.135:50400/match?q=CCAGAAAATTTGCGTCCAGT&k=0&no_gap=0&offset=0&limit=47
0.487 | 0.001 | cgi_end;

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