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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 21:51:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus cDNA, clone: LjCa-011-CH01, 5' end, suspension-cultured cells.
BW597644.1:455-474
TCTAAAACCAGATCTAATTTCTAAGCCAAA455ACTGTCCACTGATTTGTCGGTTTCTCAATAC
Lotus japonicus cDNA, clone: LjFL1-029-BD10, 5' end, protoplasts prepared from suspension-cultured cells.
BW607674.1:469-488
TCTAAAACCAGATCTAATTTCTAAGCCAAA469ACTGTCCACTGATTTGTCGG
Lotus japonicus cDNA, clone: LjFL3-018-AC05, 5'-end sequence.
FS324099.1:468-487
TCTAAAACCAGATCTAATTTCTAAGCCAAA468ACTGTCCACTGATTTGTCGGTTTCTCAATGCTCCACCACCACCACCACCA
Lotus japonicus cDNA, clone: LjFL1-029-BD10, HTC.
AK336837.1:459-478
TCTAAAACCAGATCTAATTTCTAAGCCAAA459ACTGTCCACTGATTTGTCGGTTTCTCAATACTCCACCACCACCACCAACT
Lotus japonicus genomic DNA, chromosome 4, clone: LjT37C07, TM0664.
AP007499.2:118538-118557
TCTAAAACCAGATCTAATTTCTAAGCCAAA118538ACTGTCCACTGATTTGTCGGTTTCTCAATACTCCACCACCACCACCACCA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:68368231-68368250
TCTAAAACCAGATCTAATTTCTAAGCCAAA68368231ACTGTCCACTGATTTGTCGGTTTCTCAATACTCCACCACCACCACCAACT
Chelon labrosus genome assembly, chromosome: 12.
OY741300.1:12197530-12197549
ACATCTCCTCTCTGCTCTGAATTTGGACAA12197530CCGACAAATCAGTGGACAGTCTTAGTGTGCTCTCTTTAAGACCGAGTCTC
Lotus japonicus genomic DNA, chromosome 4, clone: LjT05D12, TM0303.
AP006417.1:74781-74800
TGGTGGTGGTGGTGGTGGAGTATTGAGAAA74781CCGACAAATCAGTGGACAGTTTTGGCTTAGAAATTAGATCTGGTTTTAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTGTCCACTGATTTGTCGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTGTCCACTGATTTGTCGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.212 | 0.204 | search_plus_done; http://172.18.8.135:50400/match?q=ACTGTCCACTGATTTGTCGG&k=0&no_gap=0&offset=0&limit=50
0.244 | 0.032 | search_minus_done; http://172.18.8.135:50400/match?q=CCGACAAATCAGTGGACAGT&k=0&no_gap=0&offset=0&limit=44
0.245 | 0.001 | cgi_end;

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