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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:29:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mdfw2042e17.y1 Mdfw Malus domestica cDNA clone Mdfw2042e17 5' similar to TR:Q9SZ67 Q9SZ67 PUTATIVE DISEASE RESISTANCE PROTEIN, mRNA sequence.
CN996653.1:41-64
ATTAATTGAGTTTCTCCCTGCTCTCAAAAT41ACTTAACCTACAACGTTGCAAAAGGCTTTCAAGTATCCCAAAGAGCATTTGTAA
Mdrta1017D18.g1 Apple_EST_Mdrta Malus domestica cDNA similar to dbj|BAB11221.1| disease resistance protein [Arabidopsis thaliana], mRNA sequence.
DT003436.1:513-536
ATTAATTGAGTTTCTCCCTGCTCTCAAAAT513ACTTAACCTACAACGTTGCAAAAGGCTTTCAAGTATCCCAAAGAGCATTTGTAA
Malus hybrid cultivar cultivar Flame chromosome 4.
CP141930.1:3696584-3696607
ATTAATTGAGTTTCTCCCTGCTCTCAAAAT3696584ACTTAACCTACAACGTTGCAAAAGGCTTTCAAGTATCCCAAAGAGCATTTGTAA
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141956.1:3537837-3537860
ATTAATTGAGTTTCTCCCTGCTCTCAAAAT3537837ACTTAACCTACAACGTTGCAAAAGGCTTTCAAGTATCCCAAAGAGCATTTGTAA
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141973.1:3626680-3626703
ATTAATTGAGTTTCTCCCTGCTCTCAAAAT3626680ACTTAACCTACAACGTTGCAAAAGGCTTTCAAGTATCCCAAAGAGCATTTGTAA
Malus hybrid cultivar cultivar SH6 chromosome 4.
CP143361.1:3607931-3607954
ATTAATTGAGTTTCTCCCTGCTCTCAAAAT3607931ACTTAACCTACAACGTTGCAAAAGGCTTTCAAGTATCCCAAAGAGCATTTGTAA
Malus hybrid cultivar cultivar SH6 chromosome 4.
CP143378.1:3203776-3203799
ATTAATTGAGTTTCTCCCTGCTCTCAAAAT3203776ACTTAACCTACAACGTTGCAAAAGGCTTTCAAGTATCCCAAAGAGCATTTGTAA
Malus domestica genome assembly, chromosome: 4.
OU696680.1:3633080-3633103
ATTAATTGAGTTTCTCCCTGCTCTCAAAAT3633080ACTTAACCTACAACGTTGCAAAAGGCTTTCAAGTATCCCAAAGAGCATTTGTAA
Malus x robusta genome assembly, chromosome: 17.
OY720341.1:22187418-22187441
TTACAAATGCTCTTTGGGATACTTGAAAGC22187418CTTTTGCAACGTTGTAGGTTAAGTATTTTGAGAGCAGGGAGAAACTCAATTAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTTAACCTACAACGTTGCAAAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTTAACCTACAACGTTGCAAAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.281 | 0.272 | search_plus_done; http://172.18.8.135:50400/match?q=ACTTAACCTACAACGTTGCAAAAG&k=0&no_gap=0&offset=0&limit=50
0.373 | 0.092 | search_minus_done; http://172.18.8.135:50400/match?q=CTTTTGCAACGTTGTAGGTTAAGT&k=0&no_gap=0&offset=0&limit=42
0.374 | 0.001 | cgi_end;

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