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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:06:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

si.05.G18.5 MCol1522 cassava lambda zap Manihot esculenta cDNA 5', mRNA sequence.
CK645300.1:18-46
AAGAGGTCAAGAAGGAA18GCTTATATGGTTCCTATTGCTCCTCAAGTTTCTATCGCTCGTCAGTTCTATGAGGATGA
Manihot esculenta mRNA, clone: CAS01_018_B15, 5'end.
DB926223.1:325-353
TTCCAGCCATTTGAAGAGGTCAAGAAGGAA325GCTTATATGGTTCCTATTGCTCCTCAAGTTTCTATCGCTCGTCAGTTCTATGAGGATGA
U_SX-PL011N01_A_plate3g16.b1 Full-length enriched cDNA library of cassava MECU72 Manihot esculenta cDNA, mRNA sequence.
JG985235.1:322-350
TTCCAGCCATTTGAAGAGGTCAAGAAGGAA322GCTTATATGGTTCCTATTGCTCCTCAAGTTTCTATCGCTCGTCAGTTCTATGAGGATGA
U_UZ-100602_plate14k11.b1 Full-length enriched cDNA library of cassava MPER417-003 Manihot esculenta subsp. peruviana cDNA, mRNA sequence.
JG992043.1:333-361
TTCCAGCCATTTGAAGAGGTCAAGAAGGAA333GCTTATATGGTTCCTATTGCTCCTCAAGTTTCTATCGCTCGTCAGTTCTATGAGGATGA
U_UZ-100602_plate39b20.b1 Full-length enriched cDNA library of cassava MPER417-003 Manihot esculenta subsp. peruviana cDNA, mRNA sequence.
JG999879.1:336-364
TTCCAGCCATTTGAAGAGGTCAAGAAGGAA336GCTTATATGGTTCCTATTGCTCCTCAAGTTTCTATCGCTCGTCAGTTCTATGAGGATGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTTGAGGAGCAATAGGAACCATATAAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTTGAGGAGCAATAGGAACCATATAAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.233 | 0.224 | search_plus_done; http://172.18.8.135:50400/match?q=ACTTGAGGAGCAATAGGAACCATATAAGC&k=0&no_gap=0&offset=0&limit=50
0.862 | 0.629 | search_minus_done; http://172.18.8.135:50400/match?q=GCTTATATGGTTCCTATTGCTCCTCAAGT&k=0&no_gap=0&offset=0&limit=50
0.865 | 0.004 | cgi_end;

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