GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 02:48:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Tachina grossa genome assembly, chromosome: 3.
OX465276.1:123569588-123569607
TCAAACTAAATTGCTTTCGATTTTACATGG123569588ACTTTCGGTTGGTGGTATGGTTAAAAAAATGTTACCACCTTAATGTATAT
Ophion ventricosus genome assembly, chromosome: 3.
OZ010713.1:1975766-1975785
TTTGTGCTCGCGCACTTGTGGTTGGTATTC1975766ACTTTCGGTTGGTGGTATGGTAACACTGGAACGTTTGTCATTGGCTTACA
Daucus carota subsp. sativus cultivar DH1 chromosome 7.
CP093349.1:39265585-39265604
ATTACTTACACGAGAATGTTGATCTATGCT39265585CCATACCACCAACCGAAAGTATAATCTAATTTATTGATCCGAGAAGAACC
Daucus carota isolate Kuroda chromosome 7.
CP125307.1:39347393-39347412
ATTACTTACACGAGAATGTTGATCTATGCT39347393CCATACCACCAACCGAAAGTATAATCTAATTTATTGATCCGAGAAGAACC
Cerceris rybyensis genome assembly, chromosome: 5.
OU342793.1:4285778-4285797
CTGTACAAACTCAACATGCCCGGTTTTTAT4285778CCATACCACCAACCGAAAGTACGCAACGTTCCATTCGGGGCGCAGGATAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACTTTCGGTTGGTGGTATGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTTTCGGTTGGTGGTATGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.105 | 0.096 | search_plus_done; http://172.18.8.135:50400/match?q=ACTTTCGGTTGGTGGTATGG&k=0&no_gap=0&offset=0&limit=50
0.148 | 0.043 | search_minus_done; http://172.18.8.135:50400/match?q=CCATACCACCAACCGAAAGT&k=0&no_gap=0&offset=0&limit=48
0.150 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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