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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:31:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Blennius ocellaris genome assembly, chromosome: 22.
OY730222.1:13418011-13418030
ACATAAAAGCTTTGGGCCAAATCATTGCAG13418011ACTTTGCATAACAGGAGATACTAAAACTGCACACAAGAACTTTCTCCACT
Chrysotoxum bicinctum genome assembly, chromosome: 3.
OU426989.1:218022507-218022526
TGTGCCGATTCCAAACGACTCATGAGCAGC218022507ACTTTGCATAACAGGAGATATTCTTAAAGGATTTGTCAGTTCATCGCAAG
Xestia sexstrigata genome assembly, chromosome: 18.
OW799218.2:2366123-2366142
TTAAAGCAGACATTTTTATGTCATAATATT2366123ACTTTGCATAACAGGAGATAGCATAAACATCATTTCGCAGAAAATCGTTT
Xestia sexstrigata genome assembly, chromosome: 24.
OW799224.2:8737071-8737090
TTATAGCAGAACTTTTTGTTTCATAATATT8737071ACTTTGCATAACAGGAGATAGCATAAATTTCATATGCATAAGAATTAAAA
Anas platyrhynchos genome assembly, chromosome: 3.
LS423613.1:83859388-83859407
AGTATTGACACAAATATTCTCATGGGAAAA83859388TATCTCCTGTTATGCAAAGTATAAAGAGAATAACCCAGTGTGTTTAAACA
Xestia sexstrigata genome assembly, chromosome: 1.
OW799201.2:25129894-25129913
AAACGATTTTCTGCGAAATTAAGTTTATGC25129894TATCTCCTGTTATGCAAAGTAACATATGCCATAAAAAGTTCTGCTATAAA
Hyppa rectilinea genome assembly, chromosome: 30.
OX637330.1:3713377-3713396
CACCCTGCAAATTTTTTTTTTACCCCGGCT3713377TATCTCCTGTTATGCAAAGTTACTCACGTTATTGGCAGATCCCCTATTAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACTTTGCATAACAGGAGATA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTTTGCATAACAGGAGATA | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.189 | 0.180 | search_plus_done; http://172.18.8.135:50400/match?q=ACTTTGCATAACAGGAGATA&k=0&no_gap=0&offset=0&limit=50
0.299 | 0.110 | search_minus_done; http://172.18.8.135:50400/match?q=TATCTCCTGTTATGCAAAGT&k=0&no_gap=0&offset=0&limit=46
0.301 | 0.002 | cgi_end;

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