GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:25:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus hybrid cultivar cultivar Flame chromosome 5.
CP141931.1:7916028-7916047
AGAAACTAATTTATGAGGGGCTGAAAACAA7916028AGAAACCCGAGACTAATCATAACATTTCCAAACGAATTAGGCACTTCCCT
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:6323796-6323815
GAAACTAATTTATGAGGGGCTGAAAACAAA6323796AGAAACCCGAGACTAATCATAACACTTCCAAAAGAATTAGGTACTTCCCT
Narthecium ossifragum genome assembly, chromosome: 10.
OY986972.1:18561733-18561752
CCGGCTGTTTCTCAAGAATAGCAGAAAACC18561733AGAAACCCGAGACTAATCATCCATAAAACCTACTCAAATCTCAACTGATT
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:39048546-39048565
AGGGAAGTGCCTAATTCGTTTGGAAATGTT39048546ATGATTAGTCTCGGGTTTCTTTGTTTTCAGCCCCTCATAAATTAGTTTCT
Malus domestica genome assembly, chromosome: 5.
OU744957.1:38510518-38510537
AGGGAAGTGCCTAATTCGTTTGGAAATGTT38510518ATGATTAGTCTCGGGTTTCTTTGTTTTCAGCCCCTCATAAATTAGTTTCT
Malus domestica genome assembly, chromosome: 5.
OU744995.1:39150923-39150942
AGGGAAGTGCCTAATTCGTTTGGAAATGTT39150923ATGATTAGTCTCGGGTTTCTTTGTTTTCAGCCCCTCATAAATTAGTTTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGAAACCCGAGACTAATCAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAAACCCGAGACTAATCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.320 | 0.311 | search_plus_done; http://172.18.8.135:50400/match?q=AGAAACCCGAGACTAATCAT&k=0&no_gap=0&offset=0&limit=50
0.396 | 0.077 | search_minus_done; http://172.18.8.135:50400/match?q=ATGATTAGTCTCGGGTTTCT&k=0&no_gap=0&offset=0&limit=47
0.398 | 0.002 | cgi_end;

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