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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-03 06:19:34, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Heterocephalus glaber genome assembly, chromosome: 12.
OX090952.1:20615358-20615376
CTACTTATGGATTTGGCTGTATCTTTCATC20615358AGAAACTGCTACCTACCCAACTTTTCAGAGAATGTTTTTTCTTAGCCAG
Erinaceus europaeus genome assembly, chromosome: 11.
OX485821.1:107720023-107720041
CTGAGGGCTCATCCAAACTATCTGCATAAT107720023AGAAACTGCTACCTACCCAAGTGAATTATAATCAAATGTCACCATCTAT
Sequence 29 from patent US 8309794.
GZ594044.1:52-70
TCAAGTCCACTCAACAACAACACACCGTCA52AGAAACTGCTACCTACCCATCAACCCAAAACATTCGTAAAGATGTTTAC
Sequence 30 from patent US 8309794.
GZ594045.1:60-78
TCAAGTCCACTCAACAACAACACACCGTCA60AGAAACTGCTACCTACCCATCAACCCAAAACATTCGTAAAGATGTTTAC
Sequence 31 from patent US 8309794.
GZ594046.1:59-77
TCAAGTCCACTCAACAACAACACACCGTCA59AGAAACTGCTACCTACCCATCAACCCAAAACATTCGTAAAGATGTTTAC
Sequence 32 from patent US 8309794.
GZ594047.1:60-78
TCAAGTCCACTCAACAACAACACACCGTCA60AGAAACTGCTACCTACCCATCAACCCAAAACATTCGTAAAGATGTTTAC
Sequence 33 from patent US 8309794.
GZ594048.1:63-81
TCAAGTCCACTCAACAACAACACACCGTCA63AGAAACTGCTACCTACCCATCAACCCAAAACATTCGTAAAGATGTTTAC
Sequence 34 from patent US 8309794.
GZ594049.1:52-70
TCAAGTCCACTCAACAACAACACACCGTCA52AGAAACTGCTACCTACCCATCAACCCAAAACATTCGTAAAGATGTTTAC
Sequence 35 from patent US 8309794.
GZ594050.1:52-70
TCAAGTCCACTCAACAACAACACACCGTCA52AGAAACTGCTACCTACCCATCAACCCAAAACATTCGTAAAGATGTTTAC
Sequence 35 from patent US 8309794.
GZ594050.1:697-715
TCAAGTCCACTCAACAACAACACACCGTCA697AGAAACTGCTACCTACCCATCAACCCAAAACATTCGTAAAGATGTTTAC
Sequence 36 from patent US 8309794.
GZ594051.1:52-70
TCAAGTCCACTCAACAACAACACACCGTCA52AGAAACTGCTACCTACCCATCAACCCAAAACATTCGTAAAGATGTTTAC
Sequence 36 from patent US 8309794.
GZ594051.1:698-716
TCAAGTCCACTCAACAACAACACACCGTCA698AGAAACTGCTACCTACCCATCAACCCAAAACATTCGTAAAGATGTTTAC
Sequence 36 from patent US 8309794.
GZ594051.1:1343-1361
TCAAGTCCACTCAACAACAACACACCGTCA1343AGAAACTGCTACCTACCCATCAACCCAAAACATTCGTAAAGATGTTTAC
Sequence 37 from patent US 8309794.
GZ594052.1:21-39
CAACAAAYAACWCACCGTCA21AGAAACTGCTACCTACCCATCAACCCAWWACATTCGTAAAGATGTTTAC
Sequence 39 from patent US 8309794.
GZ594054.1:120-138
TCAAGTCCACTCAACAACAACACACCGTCA120AGAAACTGCTACCTACCCATCAACCCAAAACATTCGTAAAGATGTTTAC
Sequence 40 from patent US 8309794.
GZ594055.1:48-66
TCAAGTCCACTCAACAACAACACACCGTCA48AGAAACTGCTACCTACCCATCAACCCAAAACATTCGTAAAGATGTTTAC
Sequence 41 from patent US 8309794.
GZ594056.1:48-66
TCAAGTCCACTCAACAACAACACACCGTCA48AGAAACTGCTACCTACCCATCAACCCAAAACATTCGTAAAGATGTTTAC
Sequence 42 from patent US 8309794.
GZ594057.1:93-111
TCAAGTCCACTCAACAACAACACACCGTCA93AGAAACTGCTACCTACCCATCAACCCAAAACATTCGTAAAGATGTTTAC
Sequence 43 from patent US 8309794.
GZ594058.1:123-141
TCAAGTCCACTCAACAACAACACACCGTCA123AGAAACTGCTACCTACCCATCAACCCAAAACATTCGTAAAGATGTTTAC
Sequence 84 from patent US 8309794.
GZ594079.1:21-39
CAACAAAYAACWCACCGTCA21AGAAACTGCTACCTACCCATCAACCCAWWACATTCGTAAAGATGTTTAC
Rattus norvegicus clone CH230-484E4, WORKING DRAFT SEQUENCE, 3 unordered pieces.
AC128226.2:100185-100203
CTGTTCCTGAGGAAGTAGCTGAGGAAGCCT100185AGAAACTGCTACCTACCCATTGTTTTTGCTTCAGGCCAGGTGGCTGGGA
Trifolium repens isolate ACLI19 chromosome 06_0cc.
CP125846.1:883375-883393
TCAAGTCCACTCAACAACAACACACCGTCA883375AGAAACTGCTACCTACCCACCAACCCAAAACATTCGTAAAGATGTTTAC
Trifolium repens putative oleosin mRNA, complete cds.
GQ150345.1:85-103
TCAAGTCCACTCAACAACAACACACCGTCA85AGAAACTGCTACCTACCCATCAACCCAAAACATTCGTAAAGATGTTTAC
Trifolium occidentale genome assembly, chromosome: 6.
OZ060773.1:68513697-68513715
AGTTCAAGTCCACTCAACAACAACCCGTCA68513697AGAAACTGCTACCTACCCACCAACCCAAAACATTCGTAAAGATGTTTAC
Trifolium occidentale genome assembly, chromosome: 6.
OZ060773.1:68786197-68786215
TCAAGTCCACTCAACAACAACACACCGTCA68786197AGAAACTGCTACCTACCCACCAACCCAAAACATTCGTAAAGATGTTTAC
Trifolium striatum genome assembly, chromosome: 1.
OZ060913.1:70154886-70154904
TCAAGTACACTCAACAACAACACAACGACA70154886AGAAACTGCTACCTACCCACCACAACACCACCTACGTAAAGATGTTTAC
Polypogon viridis genome assembly, chromosome: 3.
OZ174309.1:32245463-32245481
TACTACTATCTCGGAAGAATTGTCTCACGA32245463AGAAACTGCTACCTACCCACTCAATTGTGGTTACTTCATAGGATACTCT
Polypogon viridis genome assembly, chromosome: 10.
OZ174316.1:147142471-147142489
AACTATTATCTCGGAAGAATGGTCTCACGT147142471AGAAACTGCTACCTACCCACTCACTTGTGGTTACTCAGTGTGAATCCTT
Agriphila tristella genome assembly, chromosome: 1.
OV743429.1:35890929-35890947
AGGAAATCAATTATTTTGTAAATTCAAATT35890929AGAAACTGCTACCTACCCACATCAAGGAAAACTAACAAAAATTACTTTA
Anaspis maculata genome assembly, chromosome: 2.
OX421962.1:75771189-75771207
TTTACCTCAGGTTATACTTGAAAGCCATAA75771189AGAAACTGCTACCTACCCAACATAATGTTGATCGTAACATGTTTTGGGT
Heterocephalus glaber genome assembly, chromosome: 12.
OX090920.1:21639005-21639023
CTGGCTAAGAAAAAACATTCTCTGAAAAGT21639005TGGGTAGGTAGCAGTTTCTGATGAAAGATACAGCCAAATCCATAAGTAG
Heterocephalus glaber genome assembly, chromosome: 14.
OZ001079.1:22330208-22330226
CTGGCTAAGAAAAAACATTCTCTGAAAAGT22330208TGGGTAGGTAGCAGTTTCTGATGAAAGATACAGCCAAATCCATAAGTAG
Heterocephalus glaber genome assembly, chromosome: 14.
OZ001122.1:22339065-22339083
CTGGCTAAGAAAAAACATTCTCTGAAAAGT22339065TGGGTAGGTAGCAGTTTCTGATGAAAGATACAGCCAAATCCATAAGTAG
Spermophilus citellus genome assembly, chromosome: 10.
OZ077388.1:52007849-52007867
CTATAAGTAAACAGCTGGCAATTGCTGTCT52007849TGGGTAGGTAGCAGTTTCTTTTTTACCAGCAGCAGAATGTTCTTGAGCC
Heterocephalus glaber genome assembly, chromosome: 13.
OZ179181.1:22330208-22330226
CTGGCTAAGAAAAAACATTCTCTGAAAAGT22330208TGGGTAGGTAGCAGTTTCTGATGAAAGATACAGCCAAATCCATAAGTAG
Heterocephalus glaber genome assembly, chromosome: 13.
OZ179212.1:22339065-22339083
CTGGCTAAGAAAAAACATTCTCTGAAAAGT22339065TGGGTAGGTAGCAGTTTCTGATGAAAGATACAGCCAAATCCATAAGTAG
Rattus norvegicus clone CH230-88P23, WORKING DRAFT SEQUENCE.
AC096334.10:16556-16574
TCCCAGCCACCTGGCCTGAAGCAAAAACAA16556TGGGTAGGTAGCAGTTTCTAGGCTTCCTCAGCTACTTCCTCAGGAACAG
Trifolium subterraneum genome assembly, chromosome: 5.
OX637465.1:616573-616591
GTAAACATCTTTACGAATGTTTTGTTGTGG616573TGGGTAGGTAGCAGTTTCTTGACGTGTTGTTGTTGAGTGAACTTGAACT
Xanthia icteritia genome assembly, chromosome: 26.
OX421956.2:12324219-12324237
ATCTTTTTTGTAGCAATAAGACTAAAAGAA12324219TGGGTAGGTAGCAGTTTCTATGTCTTAAATTCTTAATAATATTATTATA
Caretta caretta genome assembly, chromosome: SLK063_ragtag_2.
OZ220764.1:62223878-62223896
TATTAGAAGAGCTCAGCTGCCTTAAAAGGA62223878TGGGTAGGTAGCAGTTTCTCCATTCACAGATGGGGAAAGTGAAGTACAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGAAACTGCTACCTACCCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAAACTGCTACCTACCCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.746 | 0.737 | search_plus_done; http://172.18.8.135:50800/match?q=AGAAACTGCTACCTACCCA&k=0&no_gap=0&offset=0&limit=50
0.882 | 0.136 | search_minus_done; http://172.18.8.135:50800/match?q=TGGGTAGGTAGCAGTTTCT&k=0&no_gap=0&offset=0&limit=20
0.889 | 0.007 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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