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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-13 03:06:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Onychomys leucogaster genome assembly, chromosome: 7.
OX460377.1:117968758-117968779
ACTGTTTTGAAAGGCATGTAGTTGGAACAG117968758AGAAAGAAGAGGAGGAAGAATGTGACATTGAGGGGATCAACAAATGAAAAAA
Peromyscus eremicus genome assembly, chromosome: 1.
OX460394.1:57362143-57362164
GGAAGAGGTCAAGGAGAAAAGAGGAAGAGG57362143AGAAAGAAGAGGAGGAAGAATGGGGAGGAATTGTTGAGGAGGAGGAGGAAGG
Onychomys leucogaster genome assembly, chromosome: 7.
OX460424.1:114650440-114650461
ACTGTTTTGAAAGGCATGTAGTTGGAACAG114650440AGAAAGAAGAGGAGGAAGAATGTGACATTGAGGGGATCAACAAATGAAAAAA
Peromyscus eremicus genome assembly, chromosome: 1.
OX460466.1:57106351-57106372
GGAAGAGGTCAAGGAGAAAAGAGGAAGAGG57106351AGAAAGAAGAGGAGGAAGAATGGGGAGGAATTGTTGAGGAGGAGGAGGAGGG
Geotrypetes seraphini genome assembly, chromosome: 2.
LR699147.1:458265937-458265958
CTTCCTGGCTCTACCTGAGGTGGCTTAGGA458265937AGAAAGAAGAGGAGGAAGAATGTTAAACAGCAGAGTTGCCACTGATGCCATC
Astatotilapia calliptera genome assembly, chromosome: 2.
LS420020.2:28220901-28220922
GGTCTCAGGGTAGTCTACCCCTGAGACTGA28220901AGAAAGAAGAGGAGGAAGAATGCAGAGACCCACCCCACGCATAAAAAAGAAG
Prochilodus lineatus satellite PliSat35-1128 sequence.
MZ161127.1:725-746
CTCTCACTGCAGGACTTATTTCTAAGGTCT725AGAAAGAAGAGGAGGAAGAATGTCACACACTAGATTTTGTTGGACATTTCAA
TSA: Cajanus cajan cultivar UPAS 120 contig22697.UPAS mRNA sequence.
EZ640414.1:23-44
TCAACGCAGATACGGGGGGATA23AGAAAGAAGAGGAGGAAGAATGTGGAGTGTGGAGTGGTGATGAAGCATGTCC
TSA: Cajanus cajan cultivar Asha contig04638.Asha mRNA sequence.
EZ652502.1:13-34
CGGGGGGGGATA13AGAAAGAAGAGGAGGAAGAATGTGGGAGTGTGGAGTGGTGATGAAGCATGTC
Musa troglodytarum cultivar karat chromosome 8.
CP097510.1:95477904-95477925
TGAAGAGGAAGGAAGAAGGGGAGGCAGTGG95477904AGAAAGAAGAGGAGGAAGAATGAAGAAGAGGAAGCAATAGAGGAGGAGGAAG
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:1133901778-1133901799
GGAGGAAGAAGGGTACCTCGGCGTCGGCAG1133901778AGAAAGAAGAGGAGGAAGAATGTTTCGCGGTGGCGGTGGTGACCAGGAGCAA
Alisma plantago-aquatica genome assembly, chromosome: 5.
OY856413.1:901371531-901371552
GGTAGGGGGCCAACCAATGGTTGTCGGTGG901371531AGAAAGAAGAGGAGGAAGAATGGTACCGTCGCGGCGGTGGTGGCGACCAGGA
Bombus campestris genome assembly, chromosome: 4.
HG995129.1:711545-711566
GAGAGAGAGGGGGAAAAAACAGAGAGATAA711545AGAAAGAAGAGGAGGAAGAATGACGCGCGGGTCAGTCACACAGCGTTTGGTA
Bombus sylvestris genome assembly, chromosome: 4.
OU443144.1:672172-672193
AGAGAGAGAGGGAAAAAGACAGAGAGATAA672172AGAAAGAAGAGGAGGAAGAATGACGCGCGGGTCAGTCACACAGCGTTTGATA
Aporrectodea icterica genome assembly, chromosome: 4.
OY744605.1:268360-268381
GAGAAAGGAAGATTGAGGAAATGGATCAGA268360AGAAAGAAGAGGAGGAAGAATGGGATGCGATGAAGACGGGAAAGACAGAGAC
Xestia rhomboidea genome assembly, chromosome: 19.
OY970775.1:7385682-7385703
TCTGACACCAGGTTAGGCTCTAACCACATG7385682AGAAAGAAGAGGAGGAAGAATGCTTGAATTGTACAAAATGTTTCCAAGACAT
Arvicola amphibius genome assembly, chromosome: 18.
LR862398.1:12466471-12466492
TTCACCCCTCTGCTAGCCTCTAAGAATTAC12466471CATTCTTCCTCCTCTTCTTTCTCTTCCTCCCCCTCCTCTTCTCGGCTAACAT
Sprattus sprattus genome assembly, chromosome: 1.
OY735285.1:73871643-73871664
AAGCTCTAAGTGATCTATCCCTTCCTCTCA73871643CATTCTTCCTCCTCTTCTTTCTGTTCCTCCCCACTCCTCCCACTCGGCCCCG
Solanum tuberosum chromosome 6 clone RHPOTKEY188N15, *** SEQUENCING IN PROGRESS ***, 12 ordered pieces.
AC214037.2:32693-32714
TGCCAAAAACCCTAATATTTCTCTCTTCAG32693CATTCTTCCTCCTCTTCTTTCTAATATGTTTCAATCACCTTCCTCTTCCAAA
Papaver somniferum cultivar Roxanne chromosome 1.
CP048213.1:140729819-140729840
TTCTCTTGGATCTTAAGTCTCCCAAATATC140729819CATTCTTCCTCCTCTTCTTTCTTCTATAAACTTGCTTTTCCTTGGTGCTATT
Sordaria macrospora strain SN1693 chromosome 4.
CP083906.1:2021336-2021357
TCTGGAATCTTTTGGCAGGCAGGCAGGCAT2021336CATTCTTCCTCCTCTTCTTTCTCCAACAAGCGCGCAAGCAGTGCTCTCTCGT
Coriaria nepalensis isolate Cnep1 chromosome 04.
CP114464.1:12369034-12369055
GCTTACCTCGTGTACCGAAACCAGGTAAGC12369034CATTCTTCCTCCTCTTCTTTCTTCTGATGCATTTTTCTCTCTACTTGTCGGA
Coriaria nepalensis isolate Cnep1 chromosome 04.
CP114484.1:12383022-12383043
GCTTACCTCGTGTACCGAAACCAGGTTAGC12383022CATTCTTCCTCCTCTTCTTTCTTCTGATGCATTTTTCTCTCTACTTGTCGAA
Malus hybrid cultivar cultivar Flame chromosome 14.
CP141940.1:16690278-16690299
CGGTTTTTTTTTTCTTCTTCTGCTTCTTCT16690278CATTCTTCCTCCTCTTCTTTCTACTTCTTCTTCTTCTGGGTTGCAGATTCGG
Malus hybrid cultivar cultivar Royalty chromosome 14.
CP141983.1:16834815-16834836
CGGTTTTTTTTTTCTTCTTCTGCTTCTTCT16834815CATTCTTCCTCCTCTTCTTTCTACTTCTTCTTCTTCTGGGTTGCAGATTCGG
Malus x robusta genome assembly, chromosome: 15.
OY720339.1:16310383-16310404
CGGTTTTTTTTTTCTTCTTCTGCTTCTTCT16310383CATTCTTCCTCCTCTTCTTTCTACTTCTTCTTCTTCTGGGTTGCAGATTCGG
Triticum monococcum genome assembly, chromosome: 2A.
OY737851.1:333636096-333636117
AATTTGCACACATGTCTAGAAAAACCTCAA333636096CATTCTTCCTCCTCTTCTTTCTCAGTTCTGCACAAATGTGTATAGAAAAACC
Urophora cardui genome assembly, chromosome: 3.
OY482672.1:15063656-15063677
TCTTGTCGTAAACGCACATATTCAATTTTA15063656CATTCTTCCTCCTCTTCTTTCTGCATATCGAATACTGTACCCAGAAAAATTA
Sepiola atlantica genome assembly, chromosome: 15.
OY744529.1:68674108-68674129
TTATGTATTTCTGTTTGTCTTTCTTGTCTT68674108CATTCTTCCTCCTCTTCTTTCTTTCATTCATTCTTTATTATATTCCTTTATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGAAAGAAGAGGAGGAAGAATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAAAGAAGAGGAGGAAGAATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.149 | 0.140 | search_plus_done; http://172.18.8.135:50400/match?q=AGAAAGAAGAGGAGGAAGAATG&k=0&no_gap=0&offset=0&limit=50
0.200 | 0.051 | search_minus_done; http://172.18.8.135:50400/match?q=CATTCTTCCTCCTCTTCTTTCT&k=0&no_gap=0&offset=0&limit=34
0.208 | 0.008 | cgi_end;

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