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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 13:00:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Muscardinus avellanarius genome assembly, chromosome: 7.
OY726564.1:102824584-102824601
GTTTGGAATATTATCAAGGACACTATATTC102824584AGAAATTTTGTGCCTGATCAATTCAAGTGGACAATAGGTTACAACCAT
Lutra lutra genome assembly, chromosome: 15.
LR738417.1:54686576-54686593
AGAGATAGAGAGTGTTCAATGCCAGAAAAA54686576AGAAATTTTGTGCCTGATGTGACAGACATTTGTTTTAACTAGCAGATT
Lagenorhynchus albirostris genome assembly, chromosome: 2.
OX459073.1:14778963-14778980
TTCAGAGAGAAAGTCATTAATGCCAAAGAA14778963AGAAATTTTGTGCCTGATGTGACAGACAGTTGCAATCAGCAGATTTGA
Rangifer tarandus platyrhyncus genome assembly, chromosome: 13.
OX459949.2:41967695-41967712
TATTTAAATGAATTAATTCTAATTCTATAG41967695AGAAATTTTGTGCCTGATGCTTTGCTGGTTTTTCTCAATAAAAAATTT
Stenella coeruleoalba genome assembly, chromosome: 1.
OX596385.1:138574548-138574565
TTCGGAGAGAAAGTCATTAATGCCAAAGAA138574548AGAAATTTTGTGCCTGATGTGACAGACAGTTGTAATCAGCAGAGTTGA
Globicephala melas genome assembly, chromosome: 1.
OY734039.1:14754609-14754626
TTCAGAGAGAAAGTCATTAATGCCAAAGAA14754609AGAAATTTTGTGCCTGATGTGACAGACAGTTGTAATCAGCAGATTTGA
Pipistrellus nathusii genome assembly, chromosome: 17.
OY882874.1:10920327-10920344
AAGACCTCCTAAGAAATTAAGTCAAGAGAG10920327AGAAATTTTGTGCCTGATAATTTTCTTTGTCTTCTTTGATCCTGAGGA
Pipistrellus nathusii genome assembly, chromosome: 17.
OY883194.1:10996716-10996733
AAGACCTCCTAAGAAATTAAGTCAAGAGAG10996716AGAAATTTTGTGCCTGATAATTTTCTTTGTCTTCTTTGATCCTGAGGA
Furcifer pardalis isolate Fpa_1 chromosome 1.
CP126890.1:3594111-3594128
ATAAATGTCTTGAGAATTGCATTTGAGATA3594111AGAAATTTTGTGCCTGATATCTACACATTGTGATCTTTTAGATACAGT
Raja brachyura genome assembly, chromosome: 2.
OY740782.1:154479982-154479999
AAAATCTTCAACATTGTTGAGATGGTTTGG154479982AGAAATTTTGTGCCTGATTCAATTGTTTTTTTTTTCCGATTCAATAGT
Valencia hispanica genome assembly, chromosome: 1.
OY747700.1:26160894-26160911
CATAAACATGTTATTAGAGATGCACCAATC26160894AGAAATTTTGTGCCTGATTTTTAATCATTTATTTTGTAAAGCTCTGAC
GQ00411.B3_L02 GQ004: Non-lignified secondary xylem from mature trees Picea glauca cDNA clone GQ00411_L02 5', mRNA sequence.
CO474782.2:781-798
GCCGTTGACGGCGATCGGAGCGCGGTTCAG781AGAAATTTTGTGCCTGATCAGTCGAATTCTAAGGCGGCGGCGGCGCAG
GQ0165.B3_C10 GQ016: Primary, secondary SHOOT -N fertil. Treatments Picea glauca cDNA clone GQ0165_C10 5', mRNA sequence.
CO481687.2:217-234
GCCGTTGACGGCGATCGGAGCGCGGTTCAG217AGAAATTTTGTGCCTGATCAGTCGAATTCTAAGGCGGCGGCGGCGCAG
WS02711.C21_F12 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02711_F12 5, mRNA sequence.
DR522295.1:786-803
GCCGTTGACGGCGATCGGAGCGCGGTTCAG786AGAAATTTTGTGCCTGATCAGTCGAATTCTAAGGCGGCGGCGGCGGCG
GQ03801.B7_D06 GQ038 - Stem - Active growth Picea glauca cDNA clone GQ03801_D06 5', mRNA sequence.
EX421971.1:643-660
GCCGTTGACGGCGATCGGAGCGCGGTTCAG643AGAAATTTTGTGCCTGATCAGTCGAATTCTAAGGCGGCGGCGCAGGCG
Picea glauca clone GQ03801_D06 mRNA sequence.
BT116520.1:643-660
GCCGTTGACGGCGATCGGAGCGCGGTTCAG643AGAAATTTTGTGCCTGATCAGTCGAATTCTAAGGCGGCGGCGCAGGCG
Quercus dentata isolate Qdleaves-2020 chromosome 9.
CP116452.1:64435104-64435121
TTAATTTATTTTCTTTTAATTAATATTTTC64435104AGAAATTTTGTGCCTGATATGGATTTCTTTTATTATTAAAATGCTTAT
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143363.1:2608689-2608706
CATTTGTGATAAAAACCCTCTCCATTTAAG2608689AGAAATTTTGTGCCTGATTGCCTGACATTTTAAAAAGCCTAAAACTAC
Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143365.1:13534033-13534050
ATTTGGGTCTTTTATTTTTGCTTGATAGAG13534033AGAAATTTTGTGCCTGATACTAGTTTGACAAATAATAGTTGTGCTTTA
Triticum aestivum genome assembly, chromosome: 6B.
LR862524.1:686210795-686210812
AGGATCAATGATGTTATTATTGTTGCAAAT686210795AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Triticum aestivum genome assembly, chromosome: 6B.
LR862545.1:674100180-674100197
AGGATCAATGATGTTATTATTGTTGCAAAT674100180AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Triticum aestivum genome assembly, chromosome: 6B.
LR862566.1:680791896-680791913
AGGATCAATGATGTTATTATTGTTGCAAAT680791896AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Triticum aestivum genome assembly, chromosome: 6B.
LR865474.1:673915921-673915938
AGGATCAATGATGTTATTATTGTTGCAAAT673915921AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Triticum aestivum genome assembly, chromosome: 6B.
LR865495.1:672209538-672209555
AGGATCAATGATGTTATTATTGTTGCAAAT672209538AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Triticum aestivum genome assembly, chromosome: 6B.
LR865516.1:695614027-695614044
AGGATCAATGATGTTATTATTGTTGCAAAT695614027AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Triticum aestivum genome assembly, chromosome: 6B.
LR865755.1:680171776-680171793
AGGATCAATGATGTTATTATTGTTGCAAAT680171776AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Triticum aestivum genome assembly, chromosome: 7A.
LR865757.1:556307398-556307415
TCCGAATGGCCCTCTCCGACAAGTTGTCGA556307398AGAAATTTTGTGCCTGATCCGCGGATGGATCGACCCAGGTGGGGTCAA
Triticum aestivum genome assembly, chromosome: 6B.
LR865776.1:664501189-664501206
AGGATCAATGATGTTATTATTGTTGCAAAT664501189AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Triticum aestivum genome assembly, chromosome: 6B.
LR877325.1:668615458-668615475
AGGATCAATGATGTTATTATTGTTGCAAAT668615458AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Triticum aestivum genome assembly, chromosome: 6B.
LR878451.1:681992144-681992161
AGGATCAATGATGTTATTATTGTTGCAAAT681992144AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Triticum aestivum genome assembly, chromosome: 6B.
LS992096.1:687936047-687936064
AGGATCAATGATGTTATTATTGTTGCAAAT687936047AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Triticum turgidum subsp. durum genome assembly, chromosome: 6B.
LT934122.1:664061772-664061789
AGGATCAATGATGTTATTATTGTTGCAAAT664061772AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Triticum aestivum genome assembly, chromosome: 6B.
OU015737.1:702028471-702028488
AGGATCAATGATGTTATTATTGTTGCAAAT702028471AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Triticum aestivum genome assembly, chromosome: 7A.
OU343175.1:562675272-562675289
TCCGAATGGCCCTCTCCGACAAGTTGTCGA562675272AGAAATTTTGTGCCTGATCCGCGGATGGATCGACCCAGGTGGGGTCAA
Triticum aestivum genome assembly, chromosome: 6B.
OU343181.1:703569114-703569131
AGGATCAATGATGTTATTATTGTTGCAAAT703569114AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Malus sylvestris genome assembly, chromosome: 6.
OU696508.1:2506847-2506864
CATTTGTGATAAAACCCCTCTCCATTTAAG2506847AGAAATTTTGTGCCTGATTGCCCGACATTTTAAGAAGCCTAGAACTGC
Malus sylvestris genome assembly, chromosome: 8.
OU696510.1:13430735-13430752
ATTTGGGTCTTTTATTTTTGCTTGATAGAG13430735AGAAATTTTGTGCCTGATACTAGTTTGACAAATAATAGTTGTGCTTTA
Malus domestica genome assembly, chromosome: 6.
OU696682.1:2561729-2561746
CATTTGTGATAAAAACCCTCTCCATTTAAG2561729AGAAATTTTGTGCCTGATTGCCCGACATTTTAAGAAGCCTAGAACTGC
Malus domestica genome assembly, chromosome: 8.
OU696684.1:13206899-13206916
ATTTGGGTCTTTTATTTTTGCTTGATAGAG13206899AGAAATTTTGTGCCTGATACTAGTTTGACAAATAATAGTTGTGCTTTA
Malus domestica genome assembly, chromosome: 6.
OU744547.1:2463621-2463638
CATTTGTGATAAAAACCCTCTCCATTTAAG2463621AGAAATTTTGTGCCTGATTGCCCGACATTTTAAGAAGCCTAGAACTAC
Malus domestica genome assembly, chromosome: 8.
OU744549.1:13551774-13551791
ATTTGGGTCTTTTATTTTTGCTTGATAGAG13551774AGAAATTTTGTGCCTGATACTAGTTTGACAAATAATAGTTGTGCTTTA
Malus domestica genome assembly, chromosome: 6.
OU744958.1:2456291-2456308
CATTTGTGATAAAAACCCTCTCCATTTAAG2456291AGAAATTTTGTGCCTGATTGCCCGACATTTTAAGAAGCCTAGAACTGC
Malus domestica genome assembly, chromosome: 8.
OU744960.1:13455928-13455945
ATTTGGGTCTTTTATTTTTGCTTGATAGAG13455928AGAAATTTTGTGCCTGATACTAGTTTGACAAATAATAGTTGTGCTTTA
Malus domestica genome assembly, chromosome: 6.
OU744996.1:2603145-2603162
CATTTGTGATAAAAACCCTCTCCATTTAAG2603145AGAAATTTTGTGCCTGATTGCCTGACATTTTAAAAAGCCTAAAACTAC
Malus domestica genome assembly, chromosome: 8.
OU744998.1:13597391-13597408
ATTTGGGTCTTTTATTTTTGCTTGATAGAG13597391AGAAATTTTGTGCCTGATACTAGTTTGACAAATAATAGTTGTGCTTTA
Triticum aestivum genome assembly, chromosome: 6B.
OU963888.1:709953787-709953804
AGGATCAATGATGTTATTATTGTTGCAAAT709953787AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Triticum aestivum genome assembly, chromosome: 6B.
OV100753.1:678363180-678363197
AGGATCAATGATGTTATTATTGTTGCAAAT678363180AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Quercus robur genome assembly, chromosome: 9.
OW028772.1:52444449-52444466
TTAATTCATTTTCTTTTAATTAATATTTTC52444449AGAAATTTTGTGCCTGATATGGATTTCTTTTATTATTAAAATGCTTAT
Triticum aestivum genome assembly, chromosome: 6B.
OW530326.1:678363180-678363197
AGGATCAATGATGTTATTATTGTTGCAAAT678363180AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Triticum aestivum genome assembly, chromosome: 6B.
OX637241.1:569203752-569203769
AGGATCAATGATGTTATTATTGTTGCAAAT569203752AGAAATTTTGTGCCTGATTTTATCGTTCTTGATATAGATTGCAATCTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX638783.1:189280733-189280750
ACTGCTAGAGATGCTATGCCTGATACTCCT189280733AGAAATTTTGTGCCTGATACTGCTAGAGATGCTATGCCTGATACTGCT
Malus x robusta genome assembly, chromosome: 14.
OY720338.1:2406765-2406782
CATTTGTGATAAAAACCCTCTCCATTTAAG2406765AGAAATTTTGTGCCTGATTGCCCGACATTTTAAGAAGCCTAGAACTGC
Malus x robusta genome assembly, chromosome: 16.
OY720340.1:13701350-13701367
ATTTGGGTCTTTTATTTTTGCTTGATAGAG13701350AGAAATTTTGTGCCTGATACTAGTTTGACAAATAATAGTTGTGCTTTA
Mucilaginibacter gotjawali DNA, complete genome.
AP017313.1:2240644-2240661
AGCGCCAATATTTTCGGCGCTGGTTTCCCA2240644AGAAATTTTGTGCCTGATTTTTCCTGGGGCGGTTCAGGCGGTTACGAG
Escherichia coli strain PapRG-04-4 chromosome, complete genome.
CP049201.1:4101155-4101172
CCTTAAGACGTGCAGAGTCAGACTGCAACG4101155AGAAATTTTGTGCCTGATTGAGCGGAGTATTGCCGGTAAGCGTTCCCA
Samia ricini White DNA, chromosome 08, sequence.
AP028164.1:13618904-13618921
GTGTTTCCATAAATAAAATGGCGGTTTGGT13618904AGAAATTTTGTGCCTGATTGCGCCTTGACCACCATACACTTACGAAAA
Hymenolepis microstoma genome assembly, chromosome: 3.
LR215991.1:25091027-25091044
ATGTCGTTTTATCGTCTTTGTTTTTGGCCC25091027AGAAATTTTGTGCCTGATTTGTGGTGGAATTTGAGACTGAATGGTATG
Thyatira batis genome assembly, chromosome: 25.
LR990510.1:2222400-2222417
TTATTAATTTGATAGAGTAAATTCTAACAT2222400AGAAATTTTGTGCCTGATATTAAAGTCTGCTTTATTGCCGTGGTGGCT
Noctua fimbriata genome assembly, chromosome: 5.
LR990926.1:13542096-13542113
ACACAGTTAGGTTTGTGGTAGTTTAGGAGG13542096AGAAATTTTGTGCCTGATGTCATATAAAAAGAGCCGAAACATTCACGG
Deilephila porcellus genome assembly, chromosome: 6.
LR999976.1:820901-820918
GATTTTTCTATTAATTATCAGCCTGGAGTC820901AGAAATTTTGTGCCTGATATGGCGATTGGCTCGCCTCCTATCACATCA
Protocalliphora azurea genome assembly, chromosome: 1.
OW026519.1:21176391-21176408
TGGCTGCTGCAATTGTGGAAGCATTTGCAT21176391AGAAATTTTGTGCCTGATAGTGTGAAGGAGCTGTGAGTGATGATGTAG
Stomorhina lunata genome assembly, chromosome: 1.
OW121740.1:25694219-25694236
TAGCCGCAGCAATTGTCGAGGCATTCGCAT25694219AGAAATTTTGTGCCTGATAGTGGGAGGGGGCGTTAAGAGTGTTCGTGT
Melolontha melolontha genome assembly, chromosome: 3.
OW285237.1:167013060-167013077
TCCCCCGGGGTTTTAGGTTGCAATGTTTGA167013060AGAAATTTTGTGCCTGATAGTTTGCTGCATATCAAAAATTCTAACCCA
Dicrocoelium dendriticum genome assembly, chromosome: 7.
OX104069.1:92723841-92723858
GCAACAGTGTAAATGTACTTCATCCTCAAC92723841AGAAATTTTGTGCCTGATGCATCGCAGAATTTTAAACTGTGCTAATGA
Eulithis testata genome assembly, chromosome: 25.
OX382218.1:1667840-1667857
TCCTTATTTAGTGTAGGGGTGCACTAAGAA1667840AGAAATTTTGTGCCTGATTGTGAATCAGCCTAAGGTGGAGCACGCTGA
Campoletis raptor genome assembly, chromosome: 6.
OX403627.1:17076702-17076719
AAGTCTATGAACAAAATAACTTTTTTTGGT17076702AGAAATTTTGTGCCTGATGAGCAGCACTTTTCTAGAGAAAAAAAAAAA
Crepidodera aurea genome assembly, chromosome: 2.
OX439473.1:80767731-80767748
GTTTTTTGCATTCGCTTCGTTAGCTCGTCT80767731AGAAATTTTGTGCCTGATTTTGATCTTGTGTTGTTTTGAAATTGCATC
Metalampra italica genome assembly, chromosome: 12.
OX452982.1:1053257-1053274
CCGATTAGCAAAATGCCAGATTATATCAGT1053257AGAAATTTTGTGCCTGATAGTTCTTCTGTAGTATTAATTATTTTATGG
Protophormia terraenovae genome assembly, chromosome: 1.
OX596073.1:55259978-55259995
TAGCTGCTGCAATTGTGGAAGCATTTGCAT55259978AGAAATTTTGTGCCTGATAGTGTGAAGGAGCTGTAAGTGATGATGTAG
Dryomyza anilis genome assembly, chromosome: 3.
OX638132.1:7692278-7692295
ATGACGTTGAGATCGCTGGGGTGTTGGCGT7692278AGAAATTTTGTGCCTGATATTGCGCGGGTGCCGCCGTCAATGTACTGA
Chrysolina americana genome assembly, chromosome: 3.
OY293412.1:54613580-54613597
CAGACTTCTGAAAAATCATTATATAGGTTT54613580AGAAATTTTGTGCCTGATAGCACATCCTTCCAATTCCTGAAAACAAAT
Endomychus coccineus genome assembly, chromosome: 1.
OY294067.1:287139956-287139973
GTTTTCTGCATTTGATTCAGAAAGTAATTT287139956AGAAATTTTGTGCCTGATTTGTGTCCACTGAGGTGAATAAAAAAAACG
Melanotus villosus genome assembly, chromosome: 1.
OY720418.1:136568705-136568722
AAAATAAAAATCAAACATTAAAATTTATTC136568705AGAAATTTTGTGCCTGATTTGTTGTAGTTAAGATTCAAAATATATATT
Hydrotaea diabolus genome assembly, chromosome: 4.
OY740719.1:126812892-126812909
TTATAATTGACTCTAAAAAAGATGTTTTCT126812892AGAAATTTTGTGCCTGATAAATGTTTTTTTATGGGAATTTCTTTGAGA
Pelosia muscerda genome assembly, chromosome: 10.
OY829108.1:12344629-12344646
AAAAAGAATATATTTTTGAACAAGAAAGTA12344629AGAAATTTTGTGCCTGATATCTTAAGTATATAATTAACTATAATTAAC
Magallana gigas genome assembly, chromosome: 5.
OY970749.1:39608445-39608462
AGCATCAGTTGTTGATTATTCATGTTTGAT39608445AGAAATTTTGTGCCTGATGGTCAGACACAGGGTTTTTATAGGGTTTAT
Galeruca laticollis genome assembly, chromosome: 2.
OY998176.1:114581251-114581268
GTCAAAACACATATTATGCGTTTTATGCCA114581251AGAAATTTTGTGCCTGATATTGAGACTTTTTTACATGTTAATGGAAAA
Phania funesta genome assembly, chromosome: 3.
OZ010654.1:65166303-65166320
AAGCGGGTTTTTTGTACGTTGGAATTTTTG65166303AGAAATTTTGTGCCTGATAATATGTTCAGACATGCACCTTAATTGCGC
Tipula lateralis genome assembly, chromosome: 2.
OZ010737.1:67714206-67714223
AAAAAAAAAAATAAAAACGTGAAAAAAAAA67714206AGAAATTTTGTGCCTGATGGAATTAAAATTAACAAGTGTATTTCGAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGAAATTTTGTGCCTGAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAAATTTTGTGCCTGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.542 | 0.533 | search_plus_done; http://172.18.8.135:50400/match?q=AGAAATTTTGTGCCTGAT&k=0&no_gap=0&offset=0&limit=50
0.691 | 0.149 | search_minus_done; http://172.18.8.135:50400/match?q=ATCAGGCACAAAATTTCT&k=0&no_gap=0&offset=0&limit=0
0.691 | 0.000 | cgi_end;

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