GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 14:12:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-1082 Pericarp Coffea canephora cDNA clone cccp9n14 5', mRNA sequence.
DV664067.1:129-153
GGGATTTGGCCGAAAATACCAATGCAGCAG129AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGTTGTCA
CGN-1130 Pericarp Coffea canephora cDNA clone cccp27f12 5', mRNA sequence.
DV664101.1:143-167
GGGATTTGGCCGAAAATACCAATGCAGCAG143AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-1167 Pericarp Coffea canephora cDNA clone cccp8a5 5', mRNA sequence.
DV664123.1:62-86
GGGATTTGGCCGAAAATACCAATGCACCAG62AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-1522 Pericarp Coffea canephora cDNA clone cccp12d12 5', mRNA sequence.
DV664389.1:142-166
GGGATTTGGCCGAAAATACCAATGCAGCAG142AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGCTGTTA
CGN-2422 Pericarp Coffea canephora cDNA clone cccp24j21 5', mRNA sequence.
DV665059.1:145-169
GGGATTTGGCCGAAAATACCAATGCAGCAG145AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-2863 Pericarp Coffea canephora cDNA clone cccp14h21 5', mRNA sequence.
DV665384.1:115-139
GGGATTTGGCCGAAAATACCAATGCAGCAG115AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCGGTTG
CGN-3707 Pericarp Coffea canephora cDNA clone cccp25m21 5', mRNA sequence.
DV665997.1:91-115
GGGATTTGGCCGAAAATACCAATGCAGCAG91AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGCTGTTA
CGN-4717 Pericarp Coffea canephora cDNA clone cccp17a4 5', mRNA sequence.
DV666742.1:245-269
GGGATTTGGCCGAAAATACCAATGCAGCAG245AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGTTGTCA
CGN-4776 Pericarp Coffea canephora cDNA clone cccp11l17 5', mRNA sequence.
DV666787.1:155-179
GGGATTTGGCCGAAAATACCAATGCAGCAG155AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-4863 Pericarp Coffea canephora cDNA clone cccp4d12 5', mRNA sequence.
DV666845.1:145-169
GGGATTTGGCCGAAAATACCAATGCAGCAG145AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-5346 Pericarp Coffea canephora cDNA clone cccp11o1 5', mRNA sequence.
DV667194.1:142-166
GGGATTTGGCCGAAAATACCAATGCAGCAG142AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-5691 Pericarp Coffea canephora cDNA clone cccp13d10 5', mRNA sequence.
DV667445.1:155-179
GGGATTTGGCCGAAAATACCAATGCAGCAG155AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCATGGCGGCGGCGGTTG
CGN-6021 Pericarp Coffea canephora cDNA clone cccp28f17 5', mRNA sequence.
DV667684.1:149-173
GGGATTTGGCCGAAAATACCAATGCAGCAG149AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGCTGTTA
CGN-6062 Pericarp Coffea canephora cDNA clone cccp18k11 5', mRNA sequence.
DV667711.1:142-166
GGGATTTGGCCGAAAATACCAATGCAGCAG142AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-8145 Pericarp Coffea canephora cDNA clone cccp23e16 5', mRNA sequence.
DV672503.1:119-143
GGGATTTGGCCGAAAATACCAATGCAGCAG119AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGCTGTTA
CGN-8297 Pericarp Coffea canephora cDNA clone cccp21p24 5', mRNA sequence.
DV672601.1:125-149
GGGATTTGGCCGAAAATACCAATGCAGCAG125AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGTTGTCA
CGN-8461 Pericarp Coffea canephora cDNA clone cccp26m7 5', mRNA sequence.
DV672706.1:128-152
GGGATTTGGCCGAAAATACCAATGCAGCAG128AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGCTGTTA
CGN-8510 Pericarp Coffea canephora cDNA clone cccp7n14 5', mRNA sequence.
DV672745.1:155-179
GGGATTTGGCCGAAAATACCAATGCAGCAG155AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCGGTTG
CGN-8541 Pericarp Coffea canephora cDNA clone cccp8c14 5', mRNA sequence.
DV672767.1:146-170
GGGATTTGGCCGAAAATACCAATGCAGCAG146AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGTTGTCA
CGN-9551 Pericarp Coffea canephora cDNA clone cccp14h21 5', mRNA sequence.
DV673472.1:115-139
GGGATTTGGCCGAAAATACCAATGCAGCAG115AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCGGTTG
CGN-9646 Pericarp Coffea canephora cDNA clone cccp5f21 5', mRNA sequence.
DV673536.1:142-166
GGGATTTGGCCGAAAATACCAATGCAGCAG142AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-10114 Pericarp Coffea canephora cDNA clone cccp20f22 5', mRNA sequence.
DV673862.1:134-158
GGGATTTGGCCGAAAATACCAATGCAGCAG134AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-11172 Pericarp Coffea canephora cDNA clone cccp27g5 5', mRNA sequence.
DV674577.1:149-173
GGGATTTGGCCGAAAATACCAATGCAGCAG149AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGCTGTTA
CGN-11958 Pericarp Coffea canephora cDNA clone cccp11n10 5', mRNA sequence.
DV675114.1:99-123
GGGATTTGGCCGAAAATACCAATGCAGCAG99AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGTTGTCA
CGN-12169 Pericarp Coffea canephora cDNA clone cccp10i13 5', mRNA sequence.
DV675267.1:91-115
GGGATTTGGCCGAAAATACCAATGCAGCAG91AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGCTGTTA
CGN-12209 Pericarp Coffea canephora cDNA clone cccp29k1 5', mRNA sequence.
DV675296.1:62-86
GGGATTTGGCCGAAAATACCAATGCAGCAG62AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGCTGTTA
CGN-12383 Pericarp Coffea canephora cDNA clone cccp9f7 5', mRNA sequence.
DV675424.1:128-152
GGGATTTGGCCGAAAATACCAATGCAGCAG128AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-13262 Pericarp Coffea canephora cDNA clone cccp13i8 5', mRNA sequence.
DV676043.1:110-134
GGGATTTGGCCGAAAATACCAATGCAGCAG110AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGCTGTTA
CGN-13325 Pericarp Coffea canephora cDNA clone cccp7j8 5', mRNA sequence.
DV676084.1:28-52
ATTTGGCCGAAAATACCAATGCAGCAG28AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGCTGTTA
CGN-13543 Pericarp Coffea canephora cDNA clone cccp20m14 5', mRNA sequence.
DV676226.1:119-143
GGGATTTGGCCGAAAATACCAATGCAGCAG119AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGCTGTTA
CGN-13678 Pericarp Coffea canephora cDNA clone cccp15k8 5', mRNA sequence.
DV676319.1:128-152
GGGATTTGGCCGAAAATACCAATGCAGCAG128AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-14798 Pericarp Coffea canephora cDNA clone cccp6m15 5', mRNA sequence.
DV677417.1:147-171
GGGATTTGGCCGAAAATACCAATGCAGCAG147AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-14804 Pericarp Coffea canephora cDNA clone cccp8j23 5', mRNA sequence.
DV677421.1:149-173
GGGATTTGGCCGAAAATACCAATGCAGCAG149AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-15514 Pericarp Coffea canephora cDNA clone cccp9o7 5', mRNA sequence.
DV677944.1:13-37
CCAATGCAGCAG13AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGCTGTTA
CGN-15541 Pericarp Coffea canephora cDNA clone cccp10e7 5', mRNA sequence.
DV677967.1:128-152
GGGATTTGGCCGAAAATACCAATGCAGCAG128AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGCTGTTA
CGN-16688 Pericarp Coffea canephora cDNA clone cccp19j8 5', mRNA sequence.
DV678765.1:155-179
GGGATTTGGCCGAAAATACCAATGCAGCAG155AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGCTGTTA
CGN-17448 Pericarp Coffea canephora cDNA clone cccp21o13 5', mRNA sequence.
DV679297.1:134-158
GGGATTTGGCCGAAAATACCAATGCAGCAG134AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGTTGTCA
CGN-26431 Leaf Coffea canephora cDNA clone cccl3c3 5', mRNA sequence.
DV685193.1:143-167
GGGATTTGGCCGAAAATACCAATGCAGCAA143AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGTTGTCA
CGN-26493 Leaf Coffea canephora cDNA clone cccl4e6 5', mRNA sequence.
DV685239.1:153-177
GGGATTTGGCCGAAAATACCAATGCAGCAG153AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-26687 Leaf Coffea canephora cDNA clone cccl4n23 5', mRNA sequence.
DV685385.1:148-172
GGGATTTGGCCGAAAATACCAATGCAGCAG148AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-26894 Leaf Coffea canephora cDNA clone cccl1i18 5', mRNA sequence.
DV685540.1:125-149
GGGATTTGGCCGAAAATACCAATGCAGCAA125AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGTTGTCA
CGN-27263 Leaf Coffea canephora cDNA clone cccl3d20 5', mRNA sequence.
DV685811.1:119-143
GGGATTTGGCCGAAAATACCAATGCAGCAG119AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGTTGTCA
CGN-28322 Leaf Coffea canephora cDNA clone cccl4l19 5', mRNA sequence.
DV686599.1:134-158
GGGATTTGGCCGAAAATACCAATGCAGCAG134AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-28456 Leaf Coffea canephora cDNA clone cccl1h18 5', mRNA sequence.
DV686700.1:130-154
GGGATTTGGCCGAAAATACCAATGCAGCAG130AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGTTGTCA
CGN-29524 Leaf Coffea canephora cDNA clone cccl8l14 5', mRNA sequence.
DV687505.1:153-177
GGGATTTGGCCGAAAATACCAATGCAGCAA153AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGTTGTCA
CGN-29745 Leaf Coffea canephora cDNA clone cccl4f21 5', mRNA sequence.
DV687673.1:142-166
GGGATTTGGCCGAAAATACCAATGCAGCAG142AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGTTGTCA
CGN-30030 Leaf Coffea canephora cDNA clone cccl3g20 5', mRNA sequence.
DV687874.1:143-167
GGGATTTGGCCGAAAATACCAATGCAGCAG143AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTGGTGGCGGCGGTTGTCA
CGN-30868 Leaf Coffea canephora cDNA clone cccl9o16 5', mRNA sequence.
DV688263.1:153-177
GGGATTTGGCCGAAAATACCAATGCAGCAG153AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-31126 Leaf Coffea canephora cDNA clone cccl10o16 5', mRNA sequence.
DV688451.1:138-162
GGGATTTGGCCGAAAATACCAATGCAGCAG138AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
CGN-31210 Leaf Coffea canephora cDNA clone cccl18k10 5', mRNA sequence.
DV688505.1:155-179
GGGATTTGGCCGAAAATACCAATGCAGCAG155AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACGGTCGTGGCGGCGGCTGTTA
AFP0AAA60YJ23RM1 BAC end, cultivar HD200-94 of Coffea canephora, genomic survey sequence.
FO571820.1:221-245
TCCCGTGACTATTTGCAGCCAATGCAGCAG221AGAAGAGTACTGAAGGCCTGGAAGAATCCAAGTACTATGGTGGTGGTGGCGGCGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGAAGAGTACTGAAGGCCTGGAAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAAGAGTACTGAAGGCCTGGAAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.663 | 2.654 | search_plus_done; http://172.18.8.135:50400/match?q=AGAAGAGTACTGAAGGCCTGGAAGA&k=0&no_gap=0&offset=0&limit=50
2.775 | 0.112 | search_minus_done; http://172.18.8.135:50400/match?q=TCTTCCAGGCCTTCAGTACTCTTCT&k=0&no_gap=0&offset=0&limit=0
2.775 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).