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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:00:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Eustoma exaltatum subsp. russellianum E_gra_c22714 mRNA sequence.
JT579418.1:306-325
GTCCGATTCATCAGCCGCCTTTAGTTTCTA306AGAAGCAGATAATGTTTTTGTTATTGTTATTTTGATTTGGACTCCGTTCT
Eustoma grandiflorum DNA, chromosome 27, draft genome sequence.
AP025066.1:31856874-31856893
GTCCGATTCATCGCCCGCCTTTAGTTTCCA31856874AGAAGCAGATAATGTTTTTGGTTATTGTTATCTTGATTTGGACTCCCTTC
Picea sitchensis clone WS02759_D07 unknown mRNA.
EF676970.1:1616-1635
AGAAGCCACAAAAAAAGCTAGAATCTTGGC1616AGAAGCAGATAATGTTTTTGCTGCAGCAAATACAAGTCCTAATGATAAAG
Chrysodeixis includens genome assembly, chromosome: 11.
LR824014.1:4604238-4604257
TAATCAGGCTACTTTTTAATCGACTGCGTC4604238AGAAGCAGATAATGTTTTTGCAGCTATTACCGCCATTCGCGTAGGTGAGC
Chrysodeixis includens genome assembly, chromosome: 7.
OW796096.1:4707436-4707455
TAATCAGGCTACTTTTTAATCGACTGCGTC4707436AGAAGCAGATAATGTTTTTGCAGCTATTACCGCCATTCGCGTAGGTGAGC
Diaphora mendica genome assembly, chromosome: 21.
OX421331.1:18995958-18995977
GCAGCTATCTTTGTTCATATTGTGGTGATA18995958AGAAGCAGATAATGTTTTTGATCTAAACACCTGGAAAAATTTAATACCAA
Bruchidius siliquastri genome assembly, chromosome: 1.
OX438529.1:18829442-18829461
TCCTCATTCATACTCAATATACCTTAAGCT18829442AGAAGCAGATAATGTTTTTGCTAACATACGATTAGTTATATATCTCTTTA
Asteroscopus sphinx genome assembly, chromosome: 15.
OX453016.1:1950584-1950603
TGCGTGTTTCAATATGATTCAGCTGATATA1950584AGAAGCAGATAATGTTTTTGCGTAACTGAGCTGTATGTAGGTCAGTTTGT
Erinaceus europaeus genome assembly, chromosome: 7.
OX485816.1:48404625-48404644
GATCAGTGTTCTACACTCTCTCACATACAA48404625CAAAAACATTATCTGCTTCTGTTACATCAGATAAAATAATATTATCTCAA
Patella pellucida genome assembly, chromosome: 7.
OU795042.1:51019551-51019570
CATCACTGCTTATACTTGGTTCTTTTTTAC51019551CAAAAACATTATCTGCTTCTACTGCAGCATTCAAGATACCCAAATCTTCA
Eugnorisma glareosa genome assembly, chromosome: 20.
OX387977.1:4004697-4004716
GATCTTCGTTGGATTTTACTATCACATCAT4004697CAAAAACATTATCTGCTTCTATTTCCTGCTCCAAATGTTGTGTTTTGATA
Asteroscopus sphinx genome assembly, chromosome: 29.
OX453030.1:3317509-3317528
GCCCTCCGAAAGACGTCGCACAGGTAACTA3317509CAAAAACATTATCTGCTTCTAAATCGTAGCTAGAAGGATTGCCAAGCACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGAAGCAGATAATGTTTTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAAGCAGATAATGTTTTTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.274 | 0.265 | search_plus_done; http://172.18.8.135:50400/match?q=AGAAGCAGATAATGTTTTTG&k=0&no_gap=0&offset=0&limit=50
0.387 | 0.113 | search_minus_done; http://172.18.8.135:50400/match?q=CAAAAACATTATCTGCTTCT&k=0&no_gap=0&offset=0&limit=42
0.390 | 0.003 | cgi_end;

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