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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-16 14:04:44, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Eptesicus nilssonii genome assembly, chromosome: 1.
OX621280.1:96155327-96155346
ATTGTGAAAATGCTCATGTATAGACAAGAT96155327AGAAGTGGAGGGAGGTTTGGAACAAGCAGGAGTAGGAGAACAAGGTGATA
Myotis daubentonii genome assembly, chromosome: 1.
OY725359.1:211519986-211520005
ATTGTGAAAATGCTCATATATAGACAAGAT211519986AGAAGTGGAGGGAGGTTTGGAAAAAGCAGGAGTAGGAGAACAAGGTGATA
Myotis mystacinus genome assembly, chromosome: 1.
OZ065553.2:210368241-210368260
ATTGTGAAAATGCTCATATATAGACAAGAT210368241AGAAGTGGAGGGAGGTTTGGAAAAGCAGGAGTAGGAGAACAAGGTGGTAT
Myotis mystacinus genome assembly, chromosome: 1.
OZ077851.1:208260193-208260212
ATTGTGAAAATGCTCATATATAGACAAGAT208260193AGAAGTGGAGGGAGGTTTGGAAAAAGCAGGAGTAGGAGAACAAGGTGATA
Myotis nattereri genome assembly, chromosome: 1.
OZ125675.1:209443930-209443949
GTTGTGAAAATGCTCATATATAGACAAGAT209443930AGAAGTGGAGGGAGGTTTGGAAAAAGCAGGAGTAGGAGAACAAGGTGATA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828094.1:28932057-28932076
TTCATGTGTTCTCCAGGATCGACTCGTGTG28932057AGAAGTGGAGGGAGGTTTGGCTCGCTCTCAACAAGGCCAAGGAGACCTAT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828188.1:27423145-27423164
TTCATGTGTTCTCCAGGATCGACTCGTGTG27423145AGAAGTGGAGGGAGGTTTGGCTCGCTCTCAACAAGGCCAAGGAGACCTAT
Hordeum vulgare genome assembly, chromosome: 1H.
OU701463.1:22267211-22267230
TTCATGTGTTCTCCAGGATCGACTCGTGTG22267211AGAAGTGGAGGGAGGTTTGGCTCGCTCTCAACAAGGCCAAGGAGACCTAT
Hordeum vulgare genome assembly, chromosome: 1H.
OX459923.1:34378498-34378517
TTCATGTGTTCTCCAGGATCGACTCGTGTG34378498AGAAGTGGAGGGAGGTTTGGCTCGCTCTCAACAAGGCCAAGGAGACCTAT
Hordeum vulgare genome assembly, chromosome: 1H.
OX459930.1:34508202-34508221
TTCATGTGTTCTCCAGGATCGACTCGTGTG34508202AGAAGTGGAGGGAGGTTTGGCTCGCTCTCAACAAGGCCAAGGAGACCTAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX460044.1:545752437-545752456
TTCACGTGTTCTCCAGGATCGACTCGTGCG545752437AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX460044.1:545807605-545807624
TTCACGTGTTCTCCAGGATCGACTCGTGCG545807605AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX460044.1:545888172-545888191
TTCACGTGTTCTCCAGGATCGACTCGTGCG545888172AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX460044.1:545943339-545943358
TTCACGTGTTCTCCAGGATCGACTCGTGCG545943339AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX460086.1:545199323-545199342
TTCATGTGTTCTCTAGGATCGACTCGCGCA545199323AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 1H.
OX460089.1:35515485-35515504
TTCATGTGTTCTCCAGGATCGACTCGTGTG35515485AGAAGTGGAGGGAGGTTTGGCTCGCTCTCAACAAGGCCAAGGAGACCTAT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460128.1:546876410-546876429
TTCACGTGTTCTCCAGGATCGACTCGTGCG546876410AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare genome assembly, chromosome: 1H.
OX460138.1:33548382-33548401
TTCATGTGTTCTCCAGGATCGACTCGTGTG33548382AGAAGTGGAGGGAGGTTTGGCTCGCTCTCAACAAGGCCAAGGAGACCTAT
Hordeum vulgare genome assembly, chromosome: 1H.
OX460166.1:31401463-31401482
TTCATGTGTTCTCCAGGATCGACTCGTGTG31401463AGAAGTGGAGGGAGGTTTGGCTCGCTCTCAACAAGGCCAAGGAGACCTAT
Hordeum vulgare genome assembly, chromosome: 1H.
OX460194.1:33885324-33885343
TTCATGTGTTCTCCAGGATCGACTCGTGTG33885324AGAAGTGGAGGGAGGTTTGGCTCGCTCTCAACAAGGCCAAGGAGACCTAT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460247.1:546874374-546874393
TTCACGTGTTCTCCAGGATCGACTCGTGCG546874374AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare genome assembly, chromosome: 5H.
OX460268.1:544609012-544609031
TTCACGTGTTCTCTAGGATCGACTCGCGCA544609012AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare genome assembly, chromosome: 5H.
OX460268.1:544636865-544636884
TTCACGTGTTCTCTAGGATCGACTCGCGCA544636865AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare genome assembly, chromosome: 5H.
OX460268.1:544658858-544658877
TTCACGTGTTCTCTAGGATCGACTCGCGCA544658858AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare genome assembly, chromosome: 5H.
OX460268.1:544713289-544713308
TTCACGTGTTCTTTAGGATCGACTCGTGCG544713289AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare genome assembly, chromosome: 5H.
OX460268.1:544775620-544775639
TTCACGTGTTCTTTAGGATCGACTCGTGCG544775620AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare genome assembly, chromosome: 5H.
OX460303.1:548742788-548742807
TTCACGTGTTCTCTAGGATCGACTCGCGCA548742788AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare genome assembly, chromosome: 5H.
OX460303.1:548764778-548764797
TTCACGTGTTCTCTAGGATCGACTCGCGCA548764778AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare genome assembly, chromosome: 5H.
OX460303.1:548819206-548819225
TTCACGTGTTCTTTAGGATCGACTCGTGCG548819206AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare genome assembly, chromosome: 5H.
OX460303.1:548881542-548881561
TTCACGTGTTCTTTAGGATCGACTCGTGCG548881542AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX590738.1:551535304-551535323
TTCATGTGTTCTCTAGGATCGACTCGCGCA551535304AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638746.1:553636656-553636675
TTCACGTGTTCTCTAGGATCGACTCGCGCA553636656AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare genome assembly, chromosome: 1H.
OX638749.1:31618399-31618418
TTCATGTGTTCTCCAGGATCGACTCGTGTG31618399AGAAGTGGAGGGAGGTTTGGCTCGCTCTCAACAAGGCCAAGGAGACCTAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638879.1:547666175-547666194
TTCACGTGTTCTCCAGGATCGACTCGTGCG547666175AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638879.1:547715867-547715886
TTCACGTGTTCTCCAGGATCGACTCGTGCG547715867AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638879.1:547820028-547820047
TTCACGTGTTCTCCAGGATCGACTCGTGCG547820028AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638879.1:547869298-547869317
TTCACGTGTTCTCCAGGATCGACTCGTGCG547869298AGAAGTGGAGGGAGGTTTGGCTCGATCTCGACAATGCCAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 5H_1.
OY737396.1:436925397-436925416
TAAGGTTCCTTCATAGGATCGACTCGTGCG436925397AGAAGTGGAGGGAGGTTTGGCTCGATCTTGACAAGGCTAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 3H_2.
OY737401.1:237955907-237955926
TTCACGTGTTCTCCAGGATTGACTCGTGCG237955907AGAAGTGGAGGGAGGTTTGGCTCGCTCTCGACAAGGCCAAGGAGACCTAT
Hordeum bulbosum genome assembly, chromosome: 5H_1.
OY737413.1:462373792-462373811
TTCATGTGTTCTCCAGGATCGACTCGTGCG462373792AGAAGTGGAGGGAGGTTTGGCTCGATCTTGACAAGGCTAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 5H_1.
OY737431.1:456499568-456499587
TTCATGTGTTCTCCAGGATCGACTCGTGCG456499568AGAAGTGGAGGGAGGTTTGGCTCGATCTTGACAAGGCTAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 5H_4.
OY737485.1:427598083-427598102
TTCACGTGTTCTCCAAGATCGACTCGTGCG427598083AGAAGTGGAGGGAGGTTTGGCTCGATATTGACAAGGCCAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 5H_1.
OY737493.1:425783427-425783446
TTCACGTGTTCTCCAGGATCGACTCGTGCG425783427AGAAGTGGAGGGAGGTTTGGCTCGATCTTGACAAGGCCAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 5H_2.
OY737500.1:435480185-435480204
TTCACGTGTTCTCCAGGATCGACTCGTGCG435480185AGAAGTGGAGGGAGGTTTGGCTCGATCTTGACAAGGCCAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 5H_4.
OY737514.1:371073188-371073207
TTCATGTGTTCTCCAGGATCGACTCGTGCG371073188AGAAGTGGAGGGAGGTTTGGCTCGTTCTCAACAAGGCCAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 5H_1.
OY737522.1:424261593-424261612
TTCATGTGTTCTCCAGGATCGACTCGTGCG424261593AGAAGTGGAGGGAGGTTTGGCTCGATCTTGACAAGGCTAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 5H_2.
OY737529.1:452783286-452783305
TTCATGTGTTCTCCAGGATCGACTCGTGCG452783286AGAAGTGGAGGGAGGTTTGGCTCGATCTTGACAAGGCTAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737647.1:245322369-245322388
TTCACGTGTTCTCCAGGATTGACTCGTGCG245322369AGAAGTGGAGGGAGGTTTGGCTCGCTCTCGATAAGGCGAAGCAGACCTGT
Hordeum bulbosum genome assembly, chromosome: 5H_1.
OY737899.1:436925397-436925416
TAAGGTTCCTTCATAGGATCGACTCGTGCG436925397AGAAGTGGAGGGAGGTTTGGCTCGATCTTGACAAGGCTAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 3H_2.
OY737904.1:237955907-237955926
TTCACGTGTTCTCCAGGATTGACTCGTGCG237955907AGAAGTGGAGGGAGGTTTGGCTCGCTCTCGACAAGGCCAAGGAGACCTAT
Hordeum bulbosum genome assembly, chromosome: 5H_4.
OY740914.1:427598083-427598102
TTCACGTGTTCTCCAAGATCGACTCGTGCG427598083AGAAGTGGAGGGAGGTTTGGCTCGATATTGACAAGGCCAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY740926.1:245322369-245322388
TTCACGTGTTCTCCAGGATTGACTCGTGCG245322369AGAAGTGGAGGGAGGTTTGGCTCGCTCTCGATAAGGCGAAGCAGACCTGT
Hordeum bulbosum genome assembly, chromosome: 5H_1.
OY740952.1:425783427-425783446
TTCACGTGTTCTCCAGGATCGACTCGTGCG425783427AGAAGTGGAGGGAGGTTTGGCTCGATCTTGACAAGGCCAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 5H_2.
OY740959.1:435480185-435480204
TTCACGTGTTCTCCAGGATCGACTCGTGCG435480185AGAAGTGGAGGGAGGTTTGGCTCGATCTTGACAAGGCCAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 5H_4.
OY740973.1:371073188-371073207
TTCATGTGTTCTCCAGGATCGACTCGTGCG371073188AGAAGTGGAGGGAGGTTTGGCTCGTTCTCAACAAGGCCAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 5H_1.
OY741239.1:424261593-424261612
TTCATGTGTTCTCCAGGATCGACTCGTGCG424261593AGAAGTGGAGGGAGGTTTGGCTCGATCTTGACAAGGCTAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 5H_2.
OY741246.1:452783286-452783305
TTCATGTGTTCTCCAGGATCGACTCGTGCG452783286AGAAGTGGAGGGAGGTTTGGCTCGATCTTGACAAGGCTAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 5H_1.
OY741358.1:456499568-456499587
TTCATGTGTTCTCCAGGATCGACTCGTGCG456499568AGAAGTGGAGGGAGGTTTGGCTCGATCTTGACAAGGCTAAGGAGACCTAC
Hordeum bulbosum genome assembly, chromosome: 5H_1.
OY741402.1:462373792-462373811
TTCATGTGTTCTCCAGGATCGACTCGTGCG462373792AGAAGTGGAGGGAGGTTTGGCTCGATCTTGACAAGGCTAAGGAGACCTAC
Amphipyra tragopoginis genome assembly, chromosome: 15.
HG992006.1:10209086-10209105
ATCTAGAGGTGTTTGCGGGCTGCCATGGTC10209086AGAAGTGGAGGGAGGTTTGGTAGGCAAAAAAGGCTTTGGCTCAGCAGTGG
Cliona orientalis genome assembly, chromosome: 7.
OZ005695.1:7767376-7767395
CCAGCTGGCCTTCAGCTAGACCACTCTTAA7767376AGAAGTGGAGGGAGGTTTGGATGGTTGCACTAACTGATTGACCATTCTGA
Acanthopagrus latus isolate v.2019 genome assembly, chromosome: 8.
LR884467.1:8546669-8546688
AAGTTAAAGAAAGGCGGAATGATTTACTGG8546669AGAAGTGGAGGGAGGTTTGGTTGTTTGCGTAGGTACGATCCAAAACCTGT
Triturus cristatus genome assembly, chromosome: 3_2.
OZ123755.1:433505098-433505117
AAAAGAGGAAGTGAGTAGCTCAAGGGAGGA433505098AGAAGTGGAGGGAGGTTTGGGGGGCTGAAAGCAGAGGGAATGGTCAGATG
Triturus cristatus genome assembly, chromosome: 5_1.
OZ123761.1:432162368-432162387
TCTTCTGATATTTATTCATTTTGCTTCTGT432162368AGAAGTGGAGGGAGGTTTGGCTACCCTCTCTTATTTAATGACAGCTCCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGAAGTGGAGGGAGGTTTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAAGTGGAGGGAGGTTTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.380 | 0.371 | search_plus_done; http://172.18.8.135:50800/match?q=AGAAGTGGAGGGAGGTTTGG&k=0&no_gap=0&offset=0&limit=50
0.574 | 0.194 | search_minus_done; http://172.18.8.135:50800/match?q=CCAAACCTCCCTCCACTTCT&k=0&no_gap=0&offset=0&limit=0
0.574 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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