GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:46:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

CV02020B1B02.f1 CV02-normalized library Manihot esculenta cDNA clone CV02020B1B02.f1, mRNA sequence.
DV456049.1:413-434
CATGGATTCTTCTTGGGTTGTTGGATGTGG413GTTTCCCAGCAGCAGCCATTCTGGTTACGCGGCTAGCATTGCAGGGTCAAGT
U_UZ-100602_plate40l08.b1 Full-length enriched cDNA library of cassava MPER417-003 Manihot esculenta subsp. peruviana cDNA, mRNA sequence.
JK000660.1:465-486
CATGGATTCTTCTTGGGTTGTTGGATGTGG465GTTTCCCAGCAGCAGCCATTCTGGTTACGCGGCTAGCATTGCAGGGTCAAGT
Manihot esculenta sugar transpoter (SWEET18) mRNA, complete cds.
KT876455.1:384-405
CATGGATTCTTCTTGGGTTGTTGGATGTGG384GTTTCCCAGCAGCAGCCATTCTGGTTACGCGGCTAGCATTGCAGGGTCAAGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGAATGGCTGCTGCTGGGAAAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAATGGCTGCTGCTGGGAAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.092 | 0.083 | search_plus_done; http://172.18.8.135:50400/match?q=AGAATGGCTGCTGCTGGGAAAC&k=0&no_gap=0&offset=0&limit=50
0.301 | 0.209 | search_minus_done; http://172.18.8.135:50400/match?q=GTTTCCCAGCAGCAGCCATTCT&k=0&no_gap=0&offset=0&limit=50
0.304 | 0.002 | cgi_end;

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