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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:25:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Heterocephalus glaber genome assembly, chromosome: 2.
OX090942.1:26317228-26317248
GATCAGAAATAGATATCCCTGAAGAGGGAC26317228AGAATTAAAAAGGAGAAGAAATGACAGATAATCCTTGATAGCTGGCCAAAA
Lutra lutra genome assembly, chromosome: 16.
LR738418.1:59606455-59606475
CAGGTGCCCTGACTTCAAATACTTTTAAAA59606455AGAATTAAAAAGGAGAAGAAAGAAACACAGTTGTATTTCAAACCCAAGCAT
Meles meles genome assembly, chromosome: 18.
OV277459.1:10132549-10132569
CAGGTGCCTCGACTTCAAATACTTTTTAAA10132549AGAATTAAAAAGGAGAAGAAAGAAACACAGTTGTATTTCAAATGCAAGCAT
Eptesicus nilssonii genome assembly, chromosome: 6.
OX621285.1:83123671-83123691
GAAGGGAAGACAGCAAGTGAAAAGGAGAGG83123671AGAATTAAAAAGGAGAAGAAAAGGAGTCACATAATGCAATGTTTATTACCC
Myotis daubentonii genome assembly, chromosome: 2.
OY725360.1:88090632-88090652
GGAAGGGAAGAGAGCACGTGAAAAGAGAAG88090632AGAATTAAAAAGGAGAAGAAAAGGAGTCACATAATCCGATGTTTCTTACCC
Globicephala melas genome assembly, chromosome: 4.
OY734042.1:66687368-66687388
AAGAAAAAAAGGGAGAAGACTCAAATCAAT66687368AGAATTAAAAAGGAGAAGAAAAAACTGACACTGCAGAAATACAAAGGATCA
Melanostigma gelatinosum genome assembly, chromosome: 21.
OX456518.1:3274893-3274913
GGGTCATTTCTCTCTGAAATGTAGTGAAAT3274893AGAATTAAAAAGGAGAAGAAAGTGGAAAGAAGATTAACTTTACACATGATC
Fringilla coelebs genome assembly, chromosome: 1.
OY740724.1:149847898-149847918
AATGATTTGAGCAAAGAAACAGGAGTTGGA149847898AGAATTAAAAAGGAGAAGAAAACAAGATAAATGGCTGCGACCTTGGAGACA
Fringilla coelebs genome assembly, chromosome: Z.
OY740727.1:52438815-52438835
AGAATATACTCACATAGTTCTGAACAAAAC52438815AGAATTAAAAAGGAGAAGAAACACAAAAGAAAACAAAAGGAAAAGATAAAT
TSA: Erynnis propertius EP7180000019929 mRNA sequence.
JP593488.1:529-549
GACAAAGAAGAAAGACAAGAACTGAAAGAT529AGAATTAAAAAGGAGAAGAAAGAAAGAAAAAAGATAAATCTGCAGATGGTA
TSA: Betula platyphylla Unigene17361_All.Beplwood mRNA sequence.
KA257282.1:133-153
AGAAAGACACAAATAAACACAGCCAATTTA133AGAATTAAAAAGGAGAAGAAAAAAGAAATCACAAAAGCTATATATCATTAA
Coriaria nepalensis isolate Cnep1 chromosome 11.
CP114471.1:225407-225427
TGCTCTCCTTGTTGCCCAAGATCCTAAGGT225407AGAATTAAAAAGGAGAAGAAATCTCTGAGTTTGTACAAATTTATGTGCTTT
Coriaria nepalensis isolate Cnep1 chromosome 11.
CP114491.1:235955-235975
TGCTCTCCTTGTTGCCCAAGATCCTAAGGT235955AGAATTAAAAAGGAGAAGAAATCTCTGAGTTTGTACAAATTTATGTGCTTT
Triticum aestivum genome assembly, chromosome: 2A.
LR878438.1:763953061-763953081
AAAAATAAAATCAGTGAAGCAAATGTAAAA763953061AGAATTAAAAAGGAGAAGAAAAAAGAAAAGAAACATCCTGGTGGAAAAAAA
Triticum aestivum genome assembly, chromosome: Un.
LS992101.1:262228156-262228176
AAAAATAAAATCAGTGAAGCAAATGTAAAA262228156AGAATTAAAAAGGAGAAGAAAAAAGAAAAGAAACATCCTGGTGGAAAAAAA
Triticum aestivum genome assembly, chromosome: 2D.
OU015726.1:640530019-640530039
AAAAATAAAATCAGTGAAGCAAATGTAAAA640530019AGAATTAAAAAGGAGAAGAAAAAAGAAAAGAAACATCCTGGTGGAAAAAAA
Misopates orontium genome assembly, chromosome: 5.
OX326950.1:10307830-10307850
TCCACGACTAACTAGCAGTCTGACATAAAT10307830AGAATTAAAAAGGAGAAGAAAAGATGGGCAGGCTATTGCCTCGAATATTGG
Alisma plantago-aquatica genome assembly, chromosome: 5.
OY856413.1:202805340-202805360
GAGGAGAGATAAAGAGAAATCCTTAAAAAG202805340AGAATTAAAAAGGAGAAGAAATTGATTAATAAAAGGGAAATATGAGGAATT
Alisma plantago-aquatica genome assembly, chromosome: 5.
OY856413.1:202811764-202811784
GAGGAGAGATAAAGAGAAATCCTTAAAAAG202811764AGAATTAAAAAGGAGAAGAAATTGATTAATAAAAGGGAAATATGAGGAATT
Alisma plantago-aquatica genome assembly, chromosome: 5.
OY856413.1:241696386-241696406
CTGGCCATTGAGCCCAATTGAAAAGAAAAG241696386AGAATTAAAAAGGAGAAGAAATTGATTAATAAAAGGGAAATATGAGTAATT
Chrysoperla carnea genome assembly, chromosome: X.
FR997759.1:31573138-31573158
AATAATTTCAGTGAATTATTTCTGAAACCA31573138AGAATTAAAAAGGAGAAGAAATAAACTAAAGTTTTACGCCAATCTGTTTGC
Apotomis turbidana genome assembly, chromosome: 2.
LR990282.1:20928907-20928927
CAACTAAACTAAACATAATAAACGGATGTT20928907AGAATTAAAAAGGAGAAGAAAAACAAAAACAAAAACAAAAAAGAAGTGCGG
Apotomis turbidana genome assembly, chromosome: 3.
LR990283.1:8060751-8060771
CAACTAAACTAAACATAATAAACGGATGTT8060751AGAATTAAAAAGGAGAAGAAAAACAAAAACAAAAACAAAAAAGAAGTGCGG
Apotomis turbidana genome assembly, chromosome: 6.
LR990286.1:26423896-26423916
CAACTAAACTAAACATAATAAACGGATGTT26423896AGAATTAAAAAGGAGAAGAAAAACAAAAACAAAAACAAAAAAGAAGTGCGG
Apotomis turbidana genome assembly, chromosome: 10.
LR990290.1:14241092-14241112
CAACTAAACTAAACATAATAAACGGATGTT14241092AGAATTAAAAAGGAGAAGAAAAACAAAAACAAAAACAAAAAAGAAGTGCGG
Apotomis turbidana genome assembly, chromosome: 10.
LR990290.1:20392090-20392110
CAACTTAACTAAACATAATAAACGGAAGTT20392090AGAATTAAAAAGGAGAAGAAAAACAAAAAAGAAGTGCGTATCAACTGAGTG
Apotomis turbidana genome assembly, chromosome: 14.
LR990294.1:11666542-11666562
CAACTAAACTAAACATAATAAACGGATGTT11666542AGAATTAAAAAGGAGAAGAAAAACAAAAACAAAAACAAAAAAGAAGTGCGG
Psylliodes chrysocephala genome assembly, chromosome: 6.
OV651818.1:78393517-78393537
TGGGTAAGTTTTAAAGCTAAATTAAGTAAC78393517AGAATTAAAAAGGAGAAGAAACCATTGGGGGAAATCTTAGTTTTAAGCCTC
Hyposoter dolosus genome assembly, chromosome: 6.
OY998134.1:14459723-14459743
GAGGTAATTATTTCTTGTGGTTCGAGAGAA14459723AGAATTAAAAAGGAGAAGAAAATGAATTTCGTTGCAGTCGCGACGTGGAAA
Galeruca laticollis genome assembly, chromosome: 4.
OY998178.1:4973342-4973362
GAATGGATAACAAAATAAAGAGAAATAGAA4973342AGAATTAAAAAGGAGAAGAAATCGGAAAAGGAGAAGGAAAAGAAGAATAAG
Ascidiella aspersa genome assembly, chromosome: 2.
OZ004608.1:38501394-38501414
AAGTTAAATCATATTAAAACCCCGGGATGA38501394AGAATTAAAAAGGAGAAGAAAGAATGAAATAAAATTGTAAATTAAACCTGG
Salticus scenicus genome assembly, chromosome: 2.
OZ005649.1:151802703-151802723
AGTGCAGACCCTTATCAAACTTATATTGAC151802703AGAATTAAAAAGGAGAAGAAATAAAATCAAAGTTAAAACAATTATAACTTA
Salticus scenicus genome assembly, chromosome: 2.
OZ005649.1:164709631-164709651
AATGCAGACCCTTATCAAACTTATATTGAT164709631AGAATTAAAAAGGAGAAGAAATAAGATCAAAATTAAATCAACTATAAGTTA
Salticus scenicus genome assembly, chromosome: 8.
OZ005655.1:25847934-25847954
AATGCAGACCCTTATCAAACTTATATTGAA25847934AGAATTAAAAAGGAGAAGAAATAAACTCAAAACAATTATAACTTACTTGTA
Salticus scenicus genome assembly, chromosome: 11.
OZ005658.1:251402547-251402567
AATGCAGACCCTTATCAAAATTATATTGAC251402547AGAATTAAAAAGGAGAAGAAATAAAATCAAAATTAAAACAATTATAACTTA
Sepia lycidas genome assembly, chromosome: 42.
OZ010612.1:49249604-49249624
ACAGAAAAAGAAAGAAAAGAAAAGAGGAAG49249604AGAATTAAAAAGGAGAAGAAAGAAAGGGAGGATACAATATAGGGAGAAGTC
Heterocephalus glaber genome assembly, chromosome: 2.
OX090910.1:19122672-19122692
TTTTGGCCAGCTATCAAGGATTATCTGTCA19122672TTTCTTCTCCTTTTTAATTCTGTCCCTCTTCAGGGATATCTATTTCTGATC
Heterocephalus glaber genome assembly, chromosome: 2.
OZ001067.1:27862146-27862166
TTTTGGCCAGCTATCAAGGATTATCTGTCA27862146TTTCTTCTCCTTTTTAATTCTGTCCCTCTTCAGGGATATCTATTTCTGATC
Heterocephalus glaber genome assembly, chromosome: 2.
OZ001110.1:27741679-27741699
TTTTGGCCAGCTATCAAGGATTATCTGTCA27741679TTTCTTCTCCTTTTTAATTCTGTCCCTCTTCAGGGATATCTATTTCTGATC
Sarcophilus harrisii genome assembly, chromosome: 3.
LR735556.1:82538058-82538078
AAAGTCTGTTTTTCCTTTACTGTTAATACC82538058TTTCTTCTCCTTTTTAATTCTTATTTTCCAAAATGACTGGATTCTAACTCT
Plecotus auritus genome assembly, chromosome: 3.
OY734024.1:138895029-138895049
GGGTAATAAACATTGCGTTATGTGACTCCT138895029TTTCTTCTCCTTTTTAATTCTCCTCTCCTTTTCACTTGCTGTCTTTCCTTC
Martes martes genome assembly, chromosome: 16.
OY734079.1:1695298-1695318
ATGCATGGGTTCCTAATACAACTGTGTTTC1695298TTTCTTCTCCTTTTTAATTCTTTTAAAAAGTATTTGAAGTCGGGGCGCCTG
Vespertilio murinus genome assembly, chromosome: 4.
OZ004707.1:115225094-115225114
GGGTAATAAATATTGCATTATGTGACTCCT115225094TTTCTTCTCCTTTTTAATTCTACTCTCCTTTTCACTTGCTGTCTTCCCTTC
Furcifer pardalis isolate Fpa_1 chromosome 1.
CP126890.1:158831197-158831217
CTACTTCAATCTAATTTCCTTACCATATAC158831197TTTCTTCTCCTTTTTAATTCTAAAGCAGCCTCTCTCCTTATTAAAAACAAC
Sciaenops ocellatus chromosome 18.
CP136883.1:1940261-1940281
AAAAAAAACAAAAAAAACAAACCTTTCACT1940261TTTCTTCTCCTTTTTAATTCTCCGCCATACTTTTGTCCACATTACATCGTT
Carassius carassius genome assembly, chromosome: 12.
OY720479.1:4678461-4678481
TTAATCATACACATCAAAGTCATAGCACAT4678461TTTCTTCTCCTTTTTAATTCTCAAAAATAATGTAATATTTGTATATAGTGT
Papilio polytes mRNA, clone: ppoa11l01-R, 3' end sequence, expressed in wing.
FY342828.1:11-31
CTTTAGGAGG11TTTCTTCTCCTTTTTAATTCTCTTTGCGACAGATTTTTAATTTTCAATTTA
Triticum monococcum genome assembly, chromosome: 2A.
OY737859.1:814775154-814775174
TTTTTTTCCACCAGGATGTTTCTTTTCTTT814775154TTTCTTCTCCTTTTTAATTCTTTTTACATTTGCTTCACTGATTTTATTTTT
Alisma plantago-aquatica genome assembly, chromosome: 1.
OY856409.1:930105896-930105916
AATTCCTCATATTTCCCTTTTATTAATCAA930105896TTTCTTCTCCTTTTTAATTCTCTTTTTAAGGATTTCTCTTTATCTCTCCTC
Alisma plantago-aquatica genome assembly, chromosome: 2.
OY856410.1:615867954-615867974
AATTCCTCATATTTCCCTTTTATTAATCAG615867954TTTCTTCTCCTTTTTAATTCTCTTTTTATGGATTTCTCTTTATCTCTCCTC
Alisma plantago-aquatica genome assembly, chromosome: 2.
OY856410.1:868925737-868925757
GATTTCTCATATTTCCCTTTTATTAATCAA868925737TTTCTTCTCCTTTTTAATTCTCTTTGTAAGGATTTCTCTTTATCTCTCCTC
Apotomis turbidana genome assembly, chromosome: 5.
LR990285.1:21337625-21337645
GTTGATCCGCACTTCTTTTTTGTTTTTGTT21337625TTTCTTCTCCTTTTTAATTCTAACTTCCGTTTATTATGTTTAGTTTAGTTG
Apotomis turbidana genome assembly, chromosome: 23.
LR990305.1:6286629-6286649
CCGCACTTCTTTTTTGTTTTTGTTTTTGTT6286629TTTCTTCTCCTTTTTAATTCTAACATCCGTTTATTATGTTTAGTTTAGTTG
Yponomeuta plumbellus genome assembly, chromosome: 19.
OX371210.1:16858044-16858064
GTGAAGGGTCTTGTTGGTATAATAAATGTT16858044TTTCTTCTCCTTTTTAATTCTTCGACGACCTCTGTGGCGCAACAGTTAGCG
Lacanobia wlatinum genome assembly, chromosome: 19.
OX388041.1:19969705-19969725
ACTTTTTTGTTACGGTAGATTATATTATGA19969705TTTCTTCTCCTTTTTAATTCTTTATTTAAAAATATAGAATTAGAATATAAA
Apotomis capreana genome assembly, chromosome: Z.
OX392498.1:18926437-18926457
CTGCACTTCTTTTTTGTTTTTGTTTTTGTT18926437TTTCTTCTCCTTTTTAATTCTAACTTCCGTTTATTATGTTTAGTTTAGTTG
Apotomis capreana genome assembly, chromosome: 8.
OX392506.1:13220401-13220421
CCGCACTTCTTTTTTGTTTTTGTTTTTGTT13220401TTTCTTCTCCTTTTTAATTCTAACTTCCGTTTATTATGTTTAGTTTAGTTG
Apotomis capreana genome assembly, chromosome: 16.
OX392514.1:8036083-8036103
GTTGATCCGCACTTCTTTTTTGTTTTTGTT8036083TTTCTTCTCCTTTTTAATTCTAACTTCCGTTTATTATGTTTAGTTTAGTTG
Conomelus anceps genome assembly, chromosome: X.
OX418222.1:26440832-26440852
TGAAAATATTTGACGCTTGGTTATTAAAGG26440832TTTCTTCTCCTTTTTAATTCTTTAAAATCAGCATAAACAAGATGTAATAAA
Hoplodrina blanda genome assembly, chromosome: 30.
OX438576.1:2934012-2934032
ACAAAGTAATAACGGCAAACGATTAAAAAC2934012TTTCTTCTCCTTTTTAATTCTGCTGACGAGACCATAGAGCAACACGGGTAC
Tricholauxania praeusta genome assembly, chromosome: 1.
OX459028.1:124657788-124657808
TCCGAATTTTTGCAATTTTCATTTTTAATT124657788TTTCTTCTCCTTTTTAATTCTTTAAGTCGTCATTTTAAGTTTGTTATAACG
Zele albiditarsus genome assembly, chromosome: 2.
OY292409.1:16590722-16590742
CATAGTCTGAGTCACAAAGGTTTTTTTTTT16590722TTTCTTCTCCTTTTTAATTCTGTATTGTTCATGTATGTGATATATTTTATT
Brachypterus glaber genome assembly, chromosome: 1.
OY294044.1:68017812-68017832
CATGAAATTCTAATTAAACATATTGTTTTT68017812TTTCTTCTCCTTTTTAATTCTTTTATTAAGGAGCAAGAATAATAATTATTA
Salticus scenicus genome assembly, chromosome: 4.
OZ005651.1:103236383-103236403
GTAAGCTATAATTGTTTTAATTTGATTTTA103236383TTTCTTCTCCTTTTTAATTCTGTCAGTATAAGTTTGATAAGGGTCTGCATT
Salticus scenicus genome assembly, chromosome: 11.
OZ005658.1:50131796-50131816
AACAAGTAAATTATAATTGTTTTTATTTTA50131796TTTCTTCTCCTTTTTAATTCTGTCAATATAAGTTTTTTAAGGGTCTGCATT
Salticus scenicus genome assembly, chromosome: 14.
OZ005661.1:105950889-105950909
TAAATTATAATTGTTTTAATTTTGATTTTA105950889TTTCTTCTCCTTTTTAATTCTGTCAATATAAGTTTTATAAGGGTCTACGTT
Salticus scenicus genome assembly, chromosome: 15.
OZ005662.1:99552138-99552158
TAAGTAATAATTGTTTTAATTTTTATTTTA99552138TTTCTTCTCCTTTTTAATTCTGTCAATATAAGTTTGATAAGGTTCTGCATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGAATTAAAAAGGAGAAGAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAATTAAAAAGGAGAAGAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.275 | 0.266 | search_plus_done; http://172.18.8.135:50400/match?q=AGAATTAAAAAGGAGAAGAAA&k=0&no_gap=0&offset=0&limit=50
0.491 | 0.216 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCTTCTCCTTTTTAATTCT&k=0&no_gap=0&offset=0&limit=14
0.512 | 0.020 | cgi_end;

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