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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:41:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Meles meles genome assembly, chromosome: 7.
OV277447.1:90941596-90941614
CCCTCTAGGACTCATTTTCATGCCTGAAGC90941596AGAATTTACACTCCCTTCCCATCGCAGATTTAGCTCCTGTCCCAGGCTC
Corylus americana cultivar Rush chromosome 2.
CP125815.1:5963371-5963389
ATGTATTGGTAGTCAAATTTTACTTTGCAA5963371AGAATTTACACTCCCTTCCACTTGATTATTCACCTTGTCAATATGTAAA
Corylus americana cultivar Winkler chromosome 2.
CP125826.1:5860621-5860639
ATGTATTGGTAGTCAAATTTTATTTTGCAA5860621AGAATTTACACTCCCTTCCACTTGATTATTCACCTTGTCAATATGTAAA
Corylus avellana genome assembly, chromosome: ca2.
LR899424.1:6965245-6965263
ATGTATTGGTAGTCAAATTTTACTTTGCAA6965245AGAATTTACACTCCCTTCCACTTGATTATTCACCTTGTCAATATGTAAA
Corylus avellana genome assembly, chromosome: ca2.
LR899424.1:6977822-6977840
ATGTATTGGTAGTCAAATTTTACTTTGCAA6977822AGAATTTACACTCCCTTCCACTTGATTATTCACCTTGTCAATATGTAAA
Phorcus lineatus genome assembly, chromosome: 3.
OV121083.1:14062749-14062767
TTCACGTCAATTAACATAACTAAAATTGTC14062749AGAATTTACACTCCCTTCCTGAAACTAATTTGCATTGGCCAGGTCCTTA
Hydrotaea cyrtoneurina genome assembly, chromosome: 3.
OY282514.1:50062736-50062754
GAAAAATTCTCTTGCTGTATTTCCATCATT50062736AGAATTTACACTCCCTTCCGGTTTGTCAACAATTAGTCCCATTTTTATA
Acomys percivali genome assembly, chromosome: 9.
OU015750.1:627027-627045
AGCCCAGGTAGGCAAAGAGTGGGGTTTGGG627027GGAAGGGAGTGTAAATTCTTCTCCCTGGCAACTCTCTGGGGGCAGCTGG
Rhinatrema bivittatum genome assembly, chromosome: 4.
LR584390.1:241099468-241099486
TTCTTTCTGTATCTTGGGGAATGATTCAGG241099468GGAAGGGAGTGTAAATTCTGACAATATAATGTTTTTACTCAAAGCATGC
Osmerus eperlanus genome assembly, chromosome: 14.
OY830027.1:7179674-7179692
GGAAAGTTTTAAGGGGGAGAAAAGGGGAGG7179674GGAAGGGAGTGTAAATTCTAGGAATTACAATGATTTTGCCAGTTTCTCT
Carpinus viminea chromosome 3.
CP054669.1:40148281-40148299
TTTACATATTGACAAGGTGAATAATCAAGT40148281GGAAGGGAGTGTAAATTCTTTGCAAAGTAAAATATGACTACTAATTCAT
Ligustrum vulgare genome assembly, chromosome: 12.
OY743179.1:54660780-54660798
TACTCTAGCGAAGGATTTTCTATATTGATT54660780GGAAGGGAGTGTAAATTCTTCAAACTTTTGTGCTTTCTCGGCGAGATCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGAATTTACACTCCCTTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAATTTACACTCCCTTCC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.185 | 0.176 | search_plus_done; http://172.18.8.135:50400/match?q=AGAATTTACACTCCCTTCC&k=0&no_gap=0&offset=0&limit=50
0.302 | 0.117 | search_minus_done; http://172.18.8.135:50400/match?q=GGAAGGGAGTGTAAATTCT&k=0&no_gap=0&offset=0&limit=43
0.305 | 0.004 | cgi_end;

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