GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:20:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Solanum melongena mRNA, clone: SmFL27G06, 5'end.
FS084792.1:230-249
CCGCCGCCTCCTCTTCACCGGAAACCACCA230AGACCTCCACCACGTTTCACGGTCTCTGCTACGTCGTCGGCGACAATATC
Aradus depressus genome assembly, chromosome: Y.
OY759227.1:5885176-5885195
TAAACGTCAGTAGTTATGGGTAAGGCAGTA5885176GTGAAACGTGGTGGAGGTCTATTGAACAAAATTATTGATAAAATACCTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGACCTCCACCACGTTTCAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGACCTCCACCACGTTTCAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.409 | 0.400 | search_plus_done; http://172.18.8.135:50400/match?q=AGACCTCCACCACGTTTCAC&k=0&no_gap=0&offset=0&limit=50
0.480 | 0.071 | search_minus_done; http://172.18.8.135:50400/match?q=GTGAAACGTGGTGGAGGTCT&k=0&no_gap=0&offset=0&limit=49
0.481 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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