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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:25:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:13476225-13476246
GTGTTAAAAGTTAAGAAATTGAAGAGATAC13476225AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGGAAATGTGTTTGG
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:20204553-20204574
GTGTAGAAAGTTAAGAAATTGAAGAGATAC20204553AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus hybrid cultivar cultivar Flame chromosome 3.
CP141912.1:28814328-28814349
ATGTAGAAAGTTAAGAAATTTAAGAGATAC28814328AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus hybrid cultivar cultivar Flame chromosome 6.
CP141915.1:2982652-2982673
GTGTAGAAAGTTAAGAAATTGAAGAGATAT2982652AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAATGTGTTTGGA
Malus hybrid cultivar cultivar Flame chromosome 6.
CP141915.1:25829231-25829252
GTATAGAAAGTTAAGAAATTAAAGAGATAT25829231AGAGAAAATTTGATGAGTATCGAAGAAAATTAAAAGAAGAAAATTTGTTTGG
Malus hybrid cultivar cultivar Flame chromosome 6.
CP141915.1:26801577-26801598
GTGTAGAAAGTTAAGAAATTGAAGAGAGAC26801577AGAGAAAATTTGATGAGTATCGAAGAAAATGTGTTTGGAAGGTGAGAATGTG
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:24635102-24635123
GCGTAGAAAGTTAAGAAATTGAAGAGATAT24635102AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATATGTTTGG
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:11187105-11187126
ATGTAGAAAGTTAAAAAATTGAAGAGATAT11187105AGAGAAAATTTGATGAGTATCGAATAAAATTAGAAGAAGAAAATGTGTTTGT
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:13657989-13658010
GTGTTAAAAGTTAAGAAATTGAAGAGATAC13657989AGAGAAAATTTGATGAGTATCGAAGAAAATTATAAGAAGGAAATGTGTTTGG
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:20574535-20574556
GTGTAGAAAGTTAAGAAATTGAAGAGATAC20574535AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus hybrid cultivar cultivar Flame chromosome 3.
CP141929.1:30496956-30496977
ATGTAGAAAGTTAAGAAATTGAAGAGATAC30496956AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus hybrid cultivar cultivar Flame chromosome 6.
CP141932.1:3023386-3023407
GTGTAGAAAGTTAAGAAATTGAAGAGATAT3023386AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAATGTGTTTGGA
Malus hybrid cultivar cultivar Flame chromosome 6.
CP141932.1:27573035-27573056
GTATAGAAAGTTAAGAAATTAAAGAGATAC27573035AGAGAAAATTTGATGAGTATCGAAGAAAATTTGTTTGGAAGGTGAGAATGTG
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2118466-2118487
GTATAAAAAGTTAAGAAATTGAAGAGATAC2118466AGAGAAAATTTGATGAGTATCGAAGAAAATTAGGAGAAGAAAATATGTTTGG
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:11715208-11715229
GTGTAGAAAGTTAAAAAATTGAAGAGATAC11715208AGAGAAAATTTGATGAGTATCGAATAAAATTAGAAGAAGAAAATGTGTTTGT
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:12568906-12568927
GTGTTAAAAGTTAAGAAATTGAAGAGATAC12568906AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGGAAATGTGTTTGG
Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141961.1:3042201-3042222
GTGTAGAAAGTTAAGAAATTGAAGAGATAT3042201AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAATGTGTTTGGA
Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141961.1:25613530-25613551
GTATAGAAAGTTAAGAAATTAAAGAGATAC25613530AGAGAAAATTTGATGAGTATCGAAGAAAATTAAAAGAAGAAAATTTGTTTGG
Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141961.1:26589221-26589242
GTGTAGAAAGTTAAGAAATTGAAGAGAGAC26589221AGAGAAAATTTGATGAGTATCGAAGAAAATGTGTTTGGAAGGTGAGAATGTG
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2233943-2233964
GTATAAAAAGTTAAGAAATTGAAGAGATAC2233943AGAGAAAATTTGATGAGTATCGAAGAAAATTAGGAGAAGAAAATATGTTTGG
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:24916037-24916058
GCGTAGAAAGTTAAGAAATTGAAGAGATAT24916037AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATATGTTTGG
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141967.1:10705797-10705818
ATGTAGAAAGTTAAAAAATTGAAGAGATAT10705797AGAGAAAATTTGATGAGTATCGAATAAAATTAGAAGAAGAAAATGTGTTTGT
Malus hybrid cultivar cultivar Royalty chromosome 17.
CP141969.1:3542127-3542148
ATGTATAAAGTTAAGAAATTGAAGAGATAT3542127AGAGAAAATTTGATGAGTATCGAAGAAAATGTGTTTGGAAGGTGAAAATGTG
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:13569313-13569334
GTGTTAAAAGTTAAGAAATTGAAGAGATAC13569313AGAGAAAATTTGATGAGTATCGAAGAAAATTATAAGAAGGAAATGTGTTTGG
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:20471084-20471105
GTGTAGAAAGTTAAGAAATTGAAGAGATAC20471084AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141978.1:3151065-3151086
GTGTAGAAAGTTAAGAAATTGAAGAGATAT3151065AGAGAAAATTTGATGAGTATCGATGAAAATTAGAAGAAGAAATGTGTTTGGA
Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141978.1:24987912-24987933
GTATAGAAAGTTAAGAAATTAAAGAGATAC24987912AGAGAAAATTTGATGAGTATCGAAGAAAATTAAAAGAAGAAAATTTGTTTGG
Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141978.1:25982896-25982917
GTGTAGAAAGTTAAGAAATTGAAGAGAGAC25982896AGAGAAAATTTGATGAGTATCGAAGAAAATGTGTTTGGAAGGTGAGAATGTG
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:26008210-26008231
GCGTAGAAAGTTAAGAAATTGAAGAGATAT26008210AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATATGTTTGG
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:11356116-11356137
ATGTAGAAAGTTAAAAAATTGAAGAGATAT11356116AGAGAAAATTTGATGAGTATCGAATAAAATTAGAAGAAGAAAATGTGTTTGT
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:13257703-13257724
GTGTTAAAAGTTAAGAAATTGAAGAGATAC13257703AGAGAAAATTTGATGAGTATCGAAGAAAATTATAAGAAGGAAATGTGTTTGG
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:20067161-20067182
GTGTAGAAAGTTAAGAAATTGAAGAGATAC20067161AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2107120-2107141
GTATAAAAAGTTAAGAAATTGAAGGGATAC2107120AGAGAAAATTTGATGAGTATCGAAGAAAATTAGGAGAAGAAAATCTGTTTGG
Malus hybrid cultivar cultivar SH6 chromosome 12.
CP143369.1:29712399-29712420
ATGTAGAAAGTTAAGAAATTGAAGAGATAC29712399AGAGAAAATTTGATGAGTATCGAAGAAAATGTGTTTGGAAGGTGAGAATGTG
Malus hybrid cultivar cultivar SH6 chromosome 17.
CP143374.1:3814011-3814032
ATGTATAAAGTTAAGAAATTGAAGAGATAT3814011AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:13889964-13889985
GTGTTAAAAGTTAAGAAATTGAAGAGATAC13889964AGAGAAAATTTGATGAGTATCGAAGAAAATGTGTTTGGAAGGTGAGAATGTG
Malus hybrid cultivar cultivar SH6 chromosome 3.
CP143377.1:12862912-12862933
GTGTATAAAGTTAAGAAATTGAAGTGATAT12862912AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus hybrid cultivar cultivar SH6 chromosome 3.
CP143377.1:27559718-27559739
ATGTAGAAAGTTAAGAAATTGAAGAGATAT27559718AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus hybrid cultivar cultivar SH6 chromosome 17.
CP143391.1:3547428-3547449
ATGTATAAAGTTAAGAAATTGAAGAGATAT3547428AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:9624666-9624687
GTGTTAAAAGTTAAGAAATTGAAGAGATAC9624666AGAGAAAATTTGATGAGTATCGAAGAAAATTATAAGAAGGAAATGTGTTTGG
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:16650495-16650516
GTGTAGAAAGTTAAGAAATTGAAGAGATAC16650495AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus sylvestris genome assembly, chromosome: 3.
OU696505.1:29016305-29016326
ATGTAGAAAGTTAAGAAATTGAAGAGATAC29016305AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2293471-2293492
GTATAAAAAGTTAAGAAATTGAAGAGATAC2293471AGAGAAAATTTGATGAGTATCGAAGAAAATTAGGAGAAGAAAATCTGTTTGG
Malus sylvestris genome assembly, chromosome: 17.
OU696519.1:3852142-3852163
ATGTATAAAGTTAAGAAATTGAAGAGATAT3852142AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus domestica genome assembly, chromosome: 1.
OU696677.1:10121867-10121888
GTGTTAAAAGTTAAGAAATTGAAGAGATAC10121867AGAGAAAATTTGATGAGTATCGAAGAAAATTATAAGAAGGAAATGTGTTTGG
Malus domestica genome assembly, chromosome: 1.
OU696677.1:16805579-16805600
GTGTAGAAAGTTAAGAAATTGAAGAGATAC16805579AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus domestica genome assembly, chromosome: 2.
OU696678.1:33465451-33465472
GTGTTTAAAGTTAAGAAATTGAAGAGATAC33465451AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus domestica genome assembly, chromosome: 3.
OU696679.1:30298222-30298243
ATGTAGAAAGTTAAGAAATTGAAGAGATAC30298222AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2285232-2285253
GTATAAAAAGTTAAGAAATTGAAGAGATAC2285232AGAGAAAATTTGATGAGTATCGAAGAAAATTAGGAGAAGAAAATCTGTTTGG
Malus domestica genome assembly, chromosome: 17.
OU696693.1:3774596-3774617
ATGTATAAAGTTAAGAAATTGAAGAGATAT3774596AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus domestica genome assembly, chromosome: 1.
OU744542.1:13711593-13711614
GTGTTAAAAGTTAAGAAATTGAAGAGATAC13711593AGAGAAAATTTGATGAGTATCGAAGAAAATTATAAGAAGGAAATGTGTTTGG
Malus domestica genome assembly, chromosome: 1.
OU744542.1:20513162-20513183
GTGTAGAAAGTTAAGAAATTGAAGAGATAC20513162AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2350049-2350070
GTATAAAAAGTTAAGAAATTGAAGAGATAC2350049AGAGAAAATTTGATGAGTATCGAAGAAAATTAGGAGAAGAAAATCTGTTTGG
Malus domestica genome assembly, chromosome: 17.
OU744558.1:3710921-3710942
ATGTATAAAGTTAAGAAATTGAAGAGATAT3710921AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus domestica genome assembly, chromosome: 1.
OU744953.1:13166097-13166118
GTGTTAAAAGTTAAGAAATTGAAGAGATAC13166097AGAGAAAATTTGATGAGTATCGAAGAAAATTATAAGAAGGAAATGTGTTTGG
Malus domestica genome assembly, chromosome: 1.
OU744953.1:20081172-20081193
GTGTAGAAAGTTAAGAAATTGAAGAGATAC20081172AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2374779-2374800
GTATAAAAAGTTAAGAAATTGAAGAGATAC2374779AGAGAAAATTTGATGAGTATCGAAGAAAATTAGGAGAAGAAAATCTGTTTGG
Malus domestica genome assembly, chromosome: 17.
OU744969.1:3818038-3818059
ATGTATAAAGTTAAGAAATTGAAGAGATAT3818038AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus domestica genome assembly, chromosome: 1.
OU744991.1:9938912-9938933
GTGTTAAAAGTTAAGAAATTGAAGAGATAC9938912AGAGAAAATTTGATGAGTATCGAAGAAAATTATAAGAAGGAAATGTGTTTGG
Malus domestica genome assembly, chromosome: 1.
OU744991.1:16753355-16753376
GTGTAGAAAGTTAAGAAATTGAAGAGATAC16753355AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus domestica genome assembly, chromosome: 17.
OU745007.1:4128932-4128953
ATGTATAAAGTTAAGAAATTGAAGAGATAT4128932AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Malus x robusta genome assembly, chromosome: 1.
OY720325.1:10886585-10886606
ATGTAGAAAGTTAAAAAATTGAAGAGATAT10886585AGAGAAAATTTGATGAGTATCGAATAAAATTAGAAGAAGAAAATGTGTTTGT
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:16875304-16875325
GCATAGAAAGATAAGAAATTGAAGAGATAC16875304AGAGAAAATTTGATGAGTATCGAAGAAAATAAGAAGAAGAAAATGCGTTTGG
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:36597007-36597028
TGGTTTAAAGTTAAGAAATTGACATGATAC36597007AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Crataegus laevigata genome assembly, chromosome: 6.
OY756943.1:16723527-16723548
GCATAAAAAGTTAAGAAATTAAAGAGATAC16723527AGAGAAAATTTGATGAGTATCGAAGAAAATATGTTTGGAAGGTGAGAATGTG
Crataegus laevigata genome assembly, chromosome: 7.
OY756944.1:4651969-4651990
GTGTAGAAAGTTAAGAAAATGAAGAGATAC4651969AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Crataegus laevigata genome assembly, chromosome: 7.
OY756944.1:6802234-6802255
ATCAAACATGCGTGCAATCTCCTTAAGACA6802234AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Crataegus laevigata genome assembly, chromosome: 10.
OY756947.1:13923937-13923958
GTGTAGAAAGTTAAGAAATTGAAGAGATAT13923937AGAGAAAATTTGATGAGTATCGAAGAAAATGTGTTTGGAAGGTGGGAATGTG
Crataegus laevigata genome assembly, chromosome: 17.
OY756954.1:28223020-28223041
GTGTAGAAAGTTAAGAAATTAAAGAGATAC28223020AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAATAAGAAAATGTGTTTGG
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:24167209-24167230
GTATAGAAAGTTAAGAAATCAAAGAGATAC24167209AGAGAAAATTTGATGAGTATCGGACAAAATTAGAAGTAGAAAATGTGTTTGG
Pyrus communis genome assembly, chromosome: 15.
OY757082.1:16662279-16662300
GTGTAGAAAGTTAAGAAATTGAAGAGATAC16662279AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG
Pyrus communis genome assembly, chromosome: 16.
OY757083.1:8914251-8914272
GTATAGAAAGTTAAGAAATTGAAGAGATAT8914251AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGAGAAAATTTGATGAGTATCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAGAAAATTTGATGAGTATCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.206 | 0.197 | search_plus_done; http://172.18.8.135:50400/match?q=AGAGAAAATTTGATGAGTATCG&k=0&no_gap=0&offset=0&limit=50
0.359 | 0.153 | search_minus_done; http://172.18.8.135:50400/match?q=CGATACTCATCAAATTTTCTCT&k=0&no_gap=0&offset=0&limit=0
0.359 | 0.000 | cgi_end;

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