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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:13:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Dianthus caryophyllus mRNA, clone: CES04F23, 5' end sequence.
FY383745.1:320-339
GCCAAAAAGAGCTCGAAGTCGAGGAGAAGA320AGAGACGCGAGAAAGAGCAGCTTTTGGGCGGTGAACTACCTGCTCGTCCT
Dianthus caryophyllus mRNA, clone: CES08E01, 5' end sequence.
FY385220.1:366-385
GCCAAAAAGAGCTCGAAGTCGAGGAGAAGA366AGAGACGCGAGAAAGAGCAGCTTTTGGGCGGTGAACTACCTGCTCGTCCT
TSA: Dianthus superbus Ds_CL2850Contig1 mRNA sequence.
JL391379.1:506-525
AGGACGAGCTGGTAGTTCACCGCCCAAAAG506CTGCTCTTTCTCGCGTCTCTTCTTCTCCTCGACTTCGAGCTTCTTTTTGG
Penicillium oxalicum strain CCTCC M 20211309 chromosome IV.
CP088338.1:1476058-1476077
AAATTAGTTGTCAGTAGCGGCTCTGGTCCC1476058CTGCTCTTTCTCGCGTCTCTTGGCTTCTTCCCTCAAGCGGCGTTCTTCTC
Penicillium oxalicum strain I1R1 chromosome IV.
CP093056.1:1496435-1496454
AAATTAGTTGTCAGTAGCGGCTCTGGTCCC1496435CTGCTCTTTCTCGCGTCTCTTGGCTTCTTCCCTCAAGCGGCGTTCTTCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGAGACGCGAGAAAGAGCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAGACGCGAGAAAGAGCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.311 | 0.302 | search_plus_done; http://172.18.8.135:50400/match?q=AGAGACGCGAGAAAGAGCAG&k=0&no_gap=0&offset=0&limit=50
0.407 | 0.096 | search_minus_done; http://172.18.8.135:50400/match?q=CTGCTCTTTCTCGCGTCTCT&k=0&no_gap=0&offset=0&limit=48
0.409 | 0.002 | cgi_end;

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