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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:52:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

OPYF00363 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone 174-C2-T3.seq, mRNA sequence.
EL681299.1:353-376
CCTCCGGTGTCTCCATTTTCCGGAGGCGGA353AGAGAGTGGAACCGGTTTAGAAGGAAATCAGCGTCGGATGCATTTGAGAAAGGA
OPYF00494 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone 175-F4-T3.seq, mRNA sequence.
EL681422.1:352-375
CCTCCGGTGTCTCCATTTTCCGGAGGCGGA352AGAGAGTGGAACCGGTTTAGAAGGAAATCAGCGTCGGATGCATTTGAGAAAGGA
OPMF00856 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 125-A04-T3.seq, mRNA sequence.
EL684618.1:320-343
CCTCCGGTGTCTCCATTTTCCGGAGGCGGA320AGAGAGTGGAACCGGTTTAGAAGGAAATCAGCGTCGGATGCATTTGAGAAAGGA
OPMF01607 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6SG_S238.seq T3, mRNA sequence.
EL685368.1:319-342
CCTCCGGTGTCTCCATTTTCCGGAGGCGGA319AGAGAGTGGAACCGGTTTAGAAGGAAATCAGCGTCGGATGCATTTGAGAAAGGA
OPVM00068 Elaeis guineensis shoot apex Elaeis guineensis cDNA clone 82-F10-T3.seq, mRNA sequence.
EL686464.1:227-250
CGGCACGGAGGAGGAGCCAAAGGAGGCGGA227AGAGAGTGGAACCGGTTTAGAAGGAAATCAGCGTCGGATGCATTTGAGAAAGGA
OPVM00371 Elaeis guineensis shoot apex Elaeis guineensis cDNA clone 85-H09-T3.seq, mRNA sequence.
EL686765.1:226-249
CGGCACGGAGGAGGAGCCAAAGGAGGCGGA226AGAGAGTGGAACCGGTTTAGAAGGAAATCAGCGTCGGATGCATTTGAGAAAGGA
OPVM00449 Elaeis guineensis shoot apex Elaeis guineensis cDNA clone 86-G04-T3.seq, mRNA sequence.
EL686843.1:316-339
CCTCCGGTGTCTCCATTTTCCGGAGGCGGA316AGAGAGTGGAACCGGTTTAGAAGGAAATCAGCGTCGGATGCATTTGAGAAAGGA
OPVM01009 Elaeis guineensis shoot apex Elaeis guineensis cDNA clone OPN0XX_B50-1W.seq, mRNA sequence.
EL687387.1:334-357
CCTCCGGTGTCTCCATTTTCCGGAGGCGGA334AGAGAGTGGAACCGGTTTAGAAGGAAATCAGCGTCGGATGCATTTGAGAAAGGA
OPVM01438 Elaeis guineensis shoot apex Elaeis guineensis cDNA clone OPN0XX_C29-9W.seq, mRNA sequence.
EL687811.1:339-362
CCTCCGGTGTCTCCATTTTCCGGAGGCGGA339AGAGAGTGGAACCGGTTTAGAAGGAAATCAGCGTCGGATGCATTTGAGAAAGGA
pOP-EO02011_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02011 5', mRNA sequence.
EY413316.1:112-135
CCTCCGGTGTCTCCATTTTCCGGAGGCGGA112AGAGAGTGGAACCGGTTTAGAAGGAAATCAGCGTCGGATGCATTTGAGAAAGGA
Contig33 DEGdwarf cDNA library from oil palm spear leaves Elaeis guineensis cDNA clone Contig33, mRNA sequence.
JZ905543.1:210-233
CCTCCGGTGTCTCCATTTTCCGGAGGCGGA210AGAGAGTGGAACCGGTTTAGAAGGAAATCAGCGTCGGATGCATTTGAGAAAGGA
TSA: Elaeis guineensis isotig01569.Elguifruit mRNA sequence.
JO088822.1:357-380
CCTCCGGTGTCTCCATTTTCCGGAGGCGGA357AGAGAGTGGAACCGGTTTAGAAGGAAATCAGCGTCGGATGCATTTGAGAAAGGA
Elaeis guineensis putative dormancy/auxin associated protein (DRM) mRNA, complete cds.
KC146057.1:1166-1189
CCTCCGGTGTCTCCATTTTCCGGAGGCGGA1166AGAGAGTGGAACCGGTTTAGAAGGAAATCAGCGTCGGATGCATTTGAGAAAGGA
Elaeis guineensis EST, clone (6lib)_isotig06379.
LM626943.1:580-603
TCCTTTCTCAAATGCATCCGACGCTGATTT580CCTTCTAAACCGGTTCCACTCTCTTCCGCCTCCGGAAAATGGAGACACCGGAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGAGAGTGGAACCGGTTTAGAAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAGAGTGGAACCGGTTTAGAAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.871 | 0.862 | search_plus_done; http://172.18.8.135:50400/match?q=AGAGAGTGGAACCGGTTTAGAAGG&k=0&no_gap=0&offset=0&limit=50
1.064 | 0.193 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTCTAAACCGGTTCCACTCTCT&k=0&no_gap=0&offset=0&limit=37
1.064 | 0.001 | cgi_end;

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