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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:12:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Porphyra yezoensis cDNA clone:PM051b12_r, 5' end.
AV435005.1:88-106
CTGGGAAGCGGAGCTCTGTGGCCAAGGGCG88AGAGCGTGGAGGATACGGTGCGGACGCTCGAGAGCTACGCCGACGCCGC
Avena longiglumis genome assembly, chromosome: 4A.
OU342750.1:278962491-278962509
CCGCCGCCGCCGTGGCGGCTTCGCAGGGGA278962491AGAGCGTGGAGGATACGGTGGCGGAAACCAAGGAGCAGGCGGCGACGGA
Pseudodesulfovibrio cashew strain SRB007 chromosome, complete genome.
CP046400.1:2053398-2053416
AGAGCCAGAAACTCCCGCTGGAATATGACG2053398AGAGCGTGGAGGATACGGTACGCGAGCATGAGGAAATCATCCGGCATAT
Takifugu rubripes genome assembly, chromosome: 17.
LR584239.2:6853593-6853611
CAGTGCTGCCATCATCAATAACTGGTCCGC6853593ACCGTATCCTCCACGCTCTTCCTTCTCTTCTTCTTCTACAATGTTGTCA
Arabis alpina genome assembly, chromosome: 6.
LT669793.1:26242249-26242267
GTCATGTCCGACGAGTCAGATTTCAGCTCC26242249ACCGTATCCTCCACGCTCTTTTCTTGAATATACTTGGAGAAGAAGTCTA
Streptomyces griseus subsp. griseus strain ATCC 13273 chromosome, complete genome.
CP032543.1:486397-486415
CTCGTCGCCACCTTCTCCTGCTGACCCATG486397ACCGTATCCTCCACGCTCTCGCCGTTTCCGCTTCCCGGAATCAACAATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGAGCGTGGAGGATACGGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAGCGTGGAGGATACGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.328 | 0.319 | search_plus_done; http://172.18.8.135:50400/match?q=AGAGCGTGGAGGATACGGT&k=0&no_gap=0&offset=0&limit=50
0.442 | 0.114 | search_minus_done; http://172.18.8.135:50400/match?q=ACCGTATCCTCCACGCTCT&k=0&no_gap=0&offset=0&limit=47
0.444 | 0.002 | cgi_end;

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