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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:14:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Rutilus rutilus genome assembly, chromosome: 4.
OX637936.1:25920571-25920590
GGAGGAAAATGAAGAGTACAGGGAAGAAGA25920571AGAGGATGGCAAAGAAGCAACAGCTAAGAGAGAGAAGAAAGTGCAACAAG
C20L_84_C04_E002.g1 USDA-Tifton Peanut Library C20L Arachis hypogaea cDNA clone C20L-084_C04 5', mRNA sequence.
ES759836.1:653-672
GGGCACAGGGACCATTGCATATGGATTTAC653AGAGGATGGCAAAGAAGCAAGGGCTG
Arachis hypogaea mRNA, clone: AHCL15K14, 5' end sequence.
FS971446.1:598-617
GGGCACAGGGACCATTGCATATGGATTTAC598AGAGGATGGCAAAGAAGCAAGGGCTGCAGGTGCTGGACCTGTCTTAGGTG
Arachis hypogaea mRNA, clone: AHCS07J21, 5' end sequence.
FS982343.1:119-138
GGGCACAGGGACCATTGCATATGGATTTAC119AGAGGATGGCAAAGAAGCAAGGGCTGCAGGTGCTGGACCTGTCTTAGGTG
TSA: Arachis hypogaea CL1Contig11153.Arhy mRNA sequence.
EZ732137.1:14-33
CATATGGATTTAC14AGAGGATGGCAAAGAAGCAAGGGCTGCAGGTGCTGGACCTGTCTTAGGTG
TSA: Arachis duranensis DurSNP_c7727.Ardu mRNA sequence.
HP007717.1:923-942
GGGCACAGGGACCATTGCATATGGATTTAC923AGAGGATGGCAAAGAAGCAAGGGCTGCAGGTGCTGGACCTGTCTTAGGTG
TSA: Arachis hypogaea Ahy.Unigene155 mRNA sequence.
JR540876.1:761-780
GGGCACAGGGACCATTGCATATGGATTTAC761AGAGGATGGCAAAGAAGCAAGGGCTGCAGGTGCTGGACCTGTCTTAGGTG
Arachis hypogaea cultivar Shitouqi chromosome A07.
CP030989.1:4279743-4279762
GGGCACAGGGACCATTGCATATGGATTTAC4279743AGAGGATGGCAAAGAAGCAAGGGCTGCAGGTGCTGGACCTGTCTTAGGTG
Arachis hypogaea cultivar Shitouqi chromosome B07.
CP030999.1:3823424-3823443
GGGCACAGGGACCATTGCATATGGATTTAC3823424AGAGGATGGCAAAGAAGCAAGGGCTGCAGGTGCTGGACCTGTCTTAGGTG
Arachis ipaensis cultivar K30076 chromosome 07.
CP049898.1:4547168-4547187
GGGCACAGGGACCATTGCATATGGATTTAC4547168AGAGGATGGCAAAGAAGCAAGGGCTGCAGGTGCTGGACCTGTCTTAGGTG
Berberis vulgaris genome assembly, chromosome: 2.
OY747125.1:69949393-69949412
TAGACTTTGGTATCTCCTTGGGCATTCGGC69949393AGAGGATGGCAAAGAAGCAAAAAAAAAAAAAAAAAAAAAATCTAAGATGG
Rutilus rutilus genome assembly, chromosome: 1.
OX637933.1:76546971-76546990
CTTGTTGTACTTTCTTCTCTCTCTTAGCTA76546971TTGCTTCTTTGCCATCCTCTTCTTCCTCCATGTACTCCTCATTTTCCTCC
Arenicellales bacterium isolate bc206049-28f6-43b1-86d3-b9ef42dd2f61 genome assembly, chromosome: 1.
OY761989.1:694974-694993
TCATTCAATGCTACTGATTGTTTTTGTCGT694974TTGCTTCTTTGCCATCCTCTTCAACAAGATAATCCTTTGTGCATGATTTT
Arachis hypogaea DNA, clone: AHGS49E14.
DH961630.1:315-334
CACCTAAGACAGGTCCAGCACCTGCAGCCC315TTGCTTCTTTGCCATCCTCTGTAAATCCATATGCAATGGTCCCTGTGCCC
Thermococcus aggregans strain TY chromosome.
CP099582.1:148764-148783
TTTACCACCCTCAACCAACACTTCAACAAT148764TTGCTTCTTTGCCATCCTCTTCACCCCTCTACTCCTCTGAGCGTTTGCTT
Blastobasis adustella genome assembly, chromosome: 13.
OU026127.1:18398014-18398033
CGAACCCAGGGTCCCTCCGTTTATTCCTGC18398014TTGCTTCTTTGCCATCCTCTATTGTAAATACCAAAAAATATATAAAGTAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGAGGATGGCAAAGAAGCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAGGATGGCAAAGAAGCAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.418 | 0.410 | search_plus_done; http://172.18.8.135:50400/match?q=AGAGGATGGCAAAGAAGCAA&k=0&no_gap=0&offset=0&limit=50
0.565 | 0.147 | search_minus_done; http://172.18.8.135:50400/match?q=TTGCTTCTTTGCCATCCTCT&k=0&no_gap=0&offset=0&limit=39
0.569 | 0.004 | cgi_end;

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