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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:45:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

GQ0166.B7_F02 GQ016: Primary, secondary SHOOT -N fertil. Treatments Picea glauca cDNA clone GQ0166_F02 3', mRNA sequence.
CO481207.2:784-803
TGTGCAAACACCTGCTGTTTCACAGAATCC784AGATACACACTGACAGTTCCAAAAGCATAAACTTGA
GQ0168.B7_E16 GQ016: Primary, secondary SHOOT -N fertil. Treatments Picea glauca cDNA clone GQ0168_E16 3', mRNA sequence.
CO481317.2:784-803
TGTGCAAACACCTGCTGTTTCACAGAATCC784AGATACACACTGACAGTTCCAAAAGCATAAACTTGAAGGCCATCATGTGT
WS00828.B21_A01 WS-X-N-A-9 Picea glauca cDNA clone WS00828_A01 3, mRNA sequence.
DR590231.1:220-239
TGTGCGAACACCTGCTGTTTCACAGAATCC220AGATACACACTGACAGTTCCAAAACCATAAACTTGAAGACCATCATATGT
GQ03211.SP6_N02 GQ032 - Shoot tip (Normalized library) Picea glauca cDNA clone GQ03211_N02 3', mRNA sequence.
EX366892.1:524-543
TGTGCGAACACCTGCTGTTTCACAGAATCC524AGATACACACTGACAGTTCCAAAACCATAAACTTGAAGACCATCATGTGT
Rutilus rutilus genome assembly, chromosome: 3.
OX637935.1:59601731-59601750
TCAGAAGGACAAAATCTAAACTAGAGAGGA59601731GGAACTGTCAGTGTGTATCTATCATCTCATAGCTTTTTTAATTTCACACG
GQ02819.B7_K15 GQ028 - Cambium / phloem scrappings (Normalized library) Picea glauca cDNA clone GQ02819_K15 5', mRNA sequence.
EX322676.1:70-89
ACATATGATGGTCTTCAAGTTTATGGTTTT70GGAACTGTCAGTGTGTATCTGGATTCTGTGAAACAGCAGGTGTTCGCACA
GQ03211.B7_N02 GQ032 - Shoot tip (Normalized library) Picea glauca cDNA clone GQ03211_N02 5', mRNA sequence.
EX366523.1:506-525
ACACATGATGGTCTTCAAGTTTATGGTTTT506GGAACTGTCAGTGTGTATCTGGATTCTGTGAAACAGCAGGTGTTCGCACA
GQ0168.B7P4_E16 GQ016: Primary, secondary SHOOT -N fertil. Treatments Picea glauca cDNA clone GQ0168_E16 N', mRNA sequence.
GT739868.1:322-341
ACACATGATGGCCTTCAAGTTTATGCTTTT322GGAACTGTCAGTGTGTATCTGGATTCTGTGAAACAGCAGGTGTTTGCACA
Picea glauca clone GQ0168_E16 mRNA sequence.
BT102190.1:1075-1094
ACACATGATGGCCTTCAAGTTTATGCTTTT1075GGAACTGTCAGTGTGTATCTGGATTCTGTGAAACAGCAGGTGTTTGCACA
Picea glauca clone GQ03211_N02 mRNA sequence.
BT109727.1:506-525
ACACATGATGGTCTTCAAGTTTATGGTTTT506GGAACTGTCAGTGTGTATCTGGATTCTGTGAAACAGCAGGTGTTCGCACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGATACACACTGACAGTTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGATACACACTGACAGTTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.327 | 0.318 | search_plus_done; http://172.18.8.135:50400/match?q=AGATACACACTGACAGTTCC&k=0&no_gap=0&offset=0&limit=50
0.654 | 0.327 | search_minus_done; http://172.18.8.135:50400/match?q=GGAACTGTCAGTGTGTATCT&k=0&no_gap=0&offset=0&limit=46
0.658 | 0.004 | cgi_end;

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