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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-03-14 16:05:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

gmrtDrNS01_23-B_M13R_H08_050.s2 Water stressed 5h segment 2 gmrtDrNS01 Glycine max cDNA 3', mRNA sequence.
CX704085.1:504-523
GTCTTCACCGGGCTAGTAAGATCATGGTTG504AGATACGGAGGGTTGCCTTTGATGCCAAGTTCGAGGTGCTTGGACTGAAT
JGI_ABWZ2939.rev ABWZ Phakopsora pachyrhizi infected soybean leaf tissue 13-15 days post inoculation with TW72-1 urediniospores Glycine max cDNA clone ABWZ2939 3', mRNA sequence.
EH222027.1:150-169
GTCTTCACCGGGCTAGTAAGATCATGGTTG150AGATACGGAGGGTTGCCTTTGATGCCAAGTTCGAGGTGCTTGGACTGAAT
JGI_ABWZ2888.rev ABWZ Phakopsora pachyrhizi infected soybean leaf tissue 13-15 days post inoculation with TW72-1 urediniospores Glycine max cDNA clone ABWZ2888 3', mRNA sequence.
EH222292.1:244-263
GTCTTCACCGGGCTAGTAAGATCATGGTTG244AGATACGGAGGGTTGCCTTTGATGCCAAGTTCGAGGTGCTTGGACTGAAT
CCCC22064.g1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC22064 3', mRNA sequence.
GR858342.1:456-475
GTCTTCACCGGGCTAGTAAGATCATGGTTG456AGATACGGAGGGTTGCCTTTGATGCCAAGTTCGAGGTGCTTGGACTGAAT
CCCC22985.g1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC22985 3', mRNA sequence.
GR859723.1:481-500
GTCTTCACCGGGCTAGTAAGATCATGGTTG481AGATACGGAGGGTTGCCTTTGATGCCAAGTTCGAGGTGCTTGGACTGAAT
Glycine max cultivar Williams 82 chromosome 11.
CP126436.1:24743779-24743798
ATGAGGTGGAGGTAAATTAGGGTTACGTTG24743779AGATACGGAGGGTTGCCTTTGATGCCAAGTTCGAGGTGCTTGGACTGAAT
Cruciata laevipes genome assembly, chromosome: 11.
OY787642.1:16330933-16330952
TAAAGAGCATGAGCAAGAGAGCTAACATTA16330933AGATACGGAGGGTTGCCTTTAATCCCAACTTCCAGATGTTTAGATTCAAT
Sequence 65186 from patent US 9012723.
HK628840.1:175-194
ATTCAGTCCAAGCACCTCGAACTTGGCATC175AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGAAGAC
sb18e05.y1 Gm-c1004 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1004-9177 5', mRNA sequence.
AI494651.1:257-276
ATTCAGTCCAAGCACCTCGAACTTGGCATC257AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGAAGAC
sd01h01.y1 Gm-c1020 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1020-458 5' similar to TR:O60166 O60166 NUCLEAR MOVEMENT PROTEIN, mRNA sequence.
AI988423.1:178-197
ATTCAGTCCAAGCACCTCGAACTTGGCATC178AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGAAGAC
sad31c07.y1 Gm-c1074 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1074-1670 5' similar to TR:Q9STN7 Q9STN7 HYPOTHETICAL 33.5 KD PROTEIN, mRNA sequence.
BG550950.1:260-279
ATTCAGTCCAAGCACCTCGAACTTGGCATC260AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGAAGAC
sav65d10.y1 Gm-c1069 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1069-7868 5' similar to TR:Q9VVA6 Q9VVA6 CG9710 PROTEIN, mRNA sequence.
CB063854.1:263-282
ATTCAGTCCAAGCACCTCGAACTTGGCATC263AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGAAGAC
JGI_ABWZ2888.fwd ABWZ Phakopsora pachyrhizi infected soybean leaf tissue 13-15 days post inoculation with TW72-1 urediniospores Glycine max cDNA clone ABWZ2888 5', mRNA sequence.
EH222287.1:185-204
ATTCAGTCCAAGCACCTCGAACTTGGCATC185AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGAAGAC
JGI_ABWZ2939.fwd ABWZ Phakopsora pachyrhizi infected soybean leaf tissue 13-15 days post inoculation with TW72-1 urediniospores Glycine max cDNA clone ABWZ2939 5', mRNA sequence.
EH222356.1:108-127
ATTCAGTCCAAGCACCTCGAACTTGGCATC108AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGAAGAC
GLNAG04TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
EV279278.1:247-266
ATTCAGTCCAAGCACCTCGAACTTGGCATC247AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGAAGAC
GLNBN15TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
EV283020.1:182-201
ATTCAGTCCAAGCACCTCGAACTTGGCATC182AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGAAGAC
GLLC121TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence.
FG986999.1:260-279
ATTCAGTCCAAGCACCTCGAACTTGGCATC260AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGAAGAC
CCCC22064.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC22064 5', mRNA sequence.
GR858341.1:253-272
ATTCAGTCCAAGCACCTCGAACTTGGCATC253AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGAAGAC
CCCC22985.b3 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC22985 5', mRNA sequence.
GR859722.1:258-277
ATTCAGTCCAAGCACCTCGAACTTGGCATC258AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGAAGAC
ocpsga0_0106_D06.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDNA, mRNA sequence.
HO016790.1:275-294
ATTCAGTCCAAGCACCTCGAACTTGGCATC275AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGGAGAC
ocpsga0_0123_G05.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDNA, mRNA sequence.
HO018115.1:272-291
ATTCAGTCCAAGCACCTCGAACTTGGCATC272AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGAAGAC
ocpsga0_0140_G02.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDNA, mRNA sequence.
HO019405.1:278-297
ATTCAGTCCAAGCACCTCGAACTTGGCATC278AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGAAGAC
ocpsga0_0225_H07.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDNA, mRNA sequence.
HO026084.1:275-294
ATTCAGTCCAAGCACCTCGAACTTGGCATC275AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGAAGAC
ocpsga0_0319_D11.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDNA, mRNA sequence.
HO033149.1:275-294
ATTCAGTCCAAGCACCTCGAACTTGGCATC275AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGAAGAC
ocpsga0_0354_G07.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDNA, mRNA sequence.
HO035811.1:279-298
ATTCAGTCCAAGCACCTCGAACTTGGCATC279AAAGGCAACCCTCCGTATCTCAACCATGATCTTACCAGCCCGGTGAAGAC
Soybean clone JCVI-FLGm-4A4 unknown mRNA.
BT090333.1:260-279
ATTCAGTCCAAGCACCTCGAACTTGGCATC260AAAGGCAACCCTCCGTATCTCAACCATGATCTTACTAGCCCGGTGAAGAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGATACGGAGGGTTGCCTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGATACGGAGGGTTGCCTTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.562 | 0.553 | search_plus_done; http://172.18.8.135:50400/match?q=AGATACGGAGGGTTGCCTTT&k=0&no_gap=0&offset=0&limit=50
1.710 | 1.149 | search_minus_done; http://172.18.8.135:50400/match?q=AAAGGCAACCCTCCGTATCT&k=0&no_gap=0&offset=0&limit=43
1.722 | 0.012 | cgi_end;

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