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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 18:34:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EST435704 tomato developing/immature green fruit Solanum lycopersicum cDNA clone cLEM18D9 5' sequence, mRNA sequence.
BF050546.1:313-339
ATATCATGTGGGGTCTTTGGATATCCTTAT313GATGAAGCTGCCACTGTAGCTATATCTACTGTCAAAGAATTTGGCAGTGACCTTAAA
Solanum lycopersicum cDNA, clone: FC08BA01, 5' end, expressed in fruit.
BW687119.1:698-724
ATATCATGTGGGGTCTTTGGATATCCTTAT698GATGAAGCTGCCACTGTAGCTATATCTACTGTCAAAGAATTTGGCAGTGACCTTAAA
Solanum lycopersicum cDNA, clone: LEFL3024D23, 5' end sequence in root.
FS182692.1:502-528
ATATCNNNNNGGGTCTTTGGATATCCTTAT502GATGAAGCTGCCACTGTAGCTATATCTACTGTCAAAGAATTTGGCAGTGACCTTAAA
Solanum lycopersicum cultivar Heinz 1706 chromosome 5 clone C05HBa0138J03, complete sequence.
AC196876.2:72618-72644
TATTTTTTTGTACTTCCCAGATATCCTTAT72618GATGAAGCTGCCACTGTAGCTATATCTACTGTCAAAGAATTTGGCAGTGACCTTAAA
Solanum lycopersicum Micro-Tom DNA, chromosome 5, draft genome sequence.
AP028939.1:65792783-65792809
TATTTTTTTGTACTTCCCAGATATCCTTAT65792783GATGAAGCTGCCACTGTAGCTATATCTACTGTCAAAGAATTTGGCAGTGACCTTAAA
Solanum lycopersicum cultivar I-3 chromosome 5.
CP023761.1:62528700-62528726
TATTTTTTTGTACTTCCCAGATATCCTTAT62528700GATGAAGCTGCCACTGTAGCTATATCTACTGTCAAAGAATTTGGCAGTGACCTTAAA
Solanum lycopersicum chromosome ch05, complete genome.
HG975517.1:61675999-61676025
TATTTTTTTGTACTTCCCAGATATCCTTAT61675999GATGAAGCTGCCACTGTAGCTATATCTACTGTCAAAGAATTTGGCAGTGACCTTAAA
Solanum lycopersicum genome assembly, chromosome: 5.
OU640348.1:63418064-63418090
TATTTTTTTGTACTTCCCAGATATCCTTAT63418064GATGAAGCTGCCACTGTAGCTATATCTACTGTCAAAGAATTTGGCAGTGACCTTAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AGATATAGCTACAGTGGCAGCTTCATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AGATATAGCTACAGTGGCAGCTTCATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.167 | 0.158 | search_plus_done; http://172.18.8.135:50400/match?q=AGATATAGCTACAGTGGCAGCTTCATC&k=0&no_gap=0&offset=0&limit=50
0.362 | 0.195 | search_minus_done; http://172.18.8.135:50400/match?q=GATGAAGCTGCCACTGTAGCTATATCT&k=0&no_gap=0&offset=0&limit=50
0.368 | 0.006 | cgi_end;

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